Alfalfa mosaic virus RNA 1 5′ UTR stem-loop

The Alfalfa mosaic virus RNA 1 5′ UTR stem-loop represents a putative stem-loop structure found in the 5′ UTR in RNA 1 of alfalfa mosaic virus. RNA 1 is responsible for encoding the viral replicase protein P1. This family is required for negative strand RNA synthesis in the alfalfa mosaic virus and may also be involved in positive strand RNA synthesis.^[1]

Alfalfa mosaic virus RNA 1 5′ UTR stem-loop
Predicted secondary structure and sequence conservation of Alfalfa mosaic virus RNA 1 5′ UTR stem-loop
Identifiers
Symbol	AMV_RNA1_SL
Rfam	RF00196
Other data
RNA type	Cis-reg
Domain(s)	Eukaryota; Viruses
SO	SO:0000204
PDB structures	PDBe

See also

• Alfalfa mosaic virus coat protein binding (CPB) RNA