| Name | Name in Greek | Tenure | Notes | Refs |
| Gaius | Γάιος | | Saint | |
| Nicholas I | Νικόλαος Α΄ | 160 | Saint | |
| Artemius | Ἀρτέμιος | | Saint | |
| Alexander I | Ἀλέξανδρος Α΄ | 305–335 | Saint | |
| John I | Ἰωάννης Α΄ | | | |
| Aetius | Ἀέτιος | 342–347 | | |
| Irenius | Εἰρήνιος | 355 | | |
| Paulinus | Παυλῖνος | | | |
| Acholius or Ascholius | Ἀχόλιος, Ἀσχόλιος | 379–384 | Saint | |
| Anysius | Ἀνύσιος | 384–407 | Saint; Division of the Roman Empire in 395 | |
| Rufus | Ῥοῦφος | 407–434 | Saint | |
| Anastasius I | Ἀναστάσιος Α΄ | 434–451 | Saint | |
| Auxitheus, Eudoxius | Αὐξίθεος, Εὐδόξιος | 451–458 | Saint | |
| Andrew | Ἀνδρέας | 481–494 | Saint | |
| Dorotheus I | Δωρόθεος Α΄ | 494–520 | Saint | |
| Aristides | Ἀριστείδης | 520–535 | | |
| Elias | Ἠλίας | 553 | Saint, Participant in the Second Council of Constantinople | |
| Thalaleus | Θαλαλεὺς | | | |
| Theodosius I | Θεοδόσιος Α΄ | 585 | | |
| Eusebius | Εὐσέβιος | 585–603 | | |
| John II | Ἰωάννης Β΄ | 603–610 | Saint, author of Book I of the Miracles of Saint Demetrius | |
| Plotinus | Πλωτῖνος | 616 | | |
| John II | Ἰωάννης Β΄ | 617–626 | Saint | |
| Paul I | Παῦλος Α΄ | 649 | | |
| John III | Ἰωάννης Γ΄ | 680 | Participant in the Third Council of Constantinople | |
| Sergius | Σέργιος | 690 | Participant in the Quinisext Council | |
| Constantine I | Κωνσταντῖνος Α΄ | | | |
| Peter | Πέτρος | before 754 | | |
| Anastasius | Ἀναστάσιος | after 754 | | |
| Basil I | Βασίλειος Α΄ | 772 | | |
| Theophilus | Θεόφιλος | 787 | Saint; Participant in the Second Council of Nicaea | |
| Thomas | Θωμᾶς | | Saint | |
| Joseph I the Studite | Ἰωσὴφ Α΄, ὁ στουδίτης | 807–809 | Saint; brother of Theodore the Studite | |
| Unknown | | 809–811 | | |
| Joseph I the Studite | Ἰωσὴφ Α΄, ὁ στουδίτης | 811–821 | Saint; brother of Theodore the Studite | |
| Leo the Philosopher | Λέων, ὁ φιλόσοφος | 839/840–843 | | |
| Anthony the Confessor | Ἀντώνιος, ὁ ὁμολογητὴς | 843 | Saint | |
| Basil II | Βασίλειος Β΄ | 843–865 | | |
| Theodore | Θεόδωρος | 866–869 | | |
| Paul II | Παῦλος Β΄ | 880–882 | | |
| Gregory I | Γρηγόριος Α΄ | 882 | | |
| Methodius | Μεθόδιος | 889 | | |
| John IV the Thessalian | Ἰωάννης Δ΄, ὁ Θεσσαλὸς | 892–904 | | |
| Basil III the Confessor | Βασίλειος Γ΄, ὁ ὁμολογητὴς | 904–? | Saint | |
| Anatolius | Ἀνατόλιος | | | |
| Isidore I | Ἰσίδωρος Α΄ | 1016 | | |
| Nicetas I | Νικήτας Α΄ | | | |
| Theophanes I | Θεοφάνης Α΄ | 1031–1038 | | |
| Prometheus | Προμηθεὺς | 1038 | | |
| Unknown | | 1063 | | |
| Theodulus | Θεόδουλος | 1086–1107 | | |
| Constantine II | Κωνσταντῖνος Β΄ | 1110 | | |
| Michael I | Μιχαὴλ Α΄ | 1122 | | |
| Nicetas II | Νικήτας Β΄ | 1133 | | |
| Constantine | Κωνσταντῖνος | after 1133 | | |
| Leo | Λέων | | | |
| Romanus | Ρωμανός | | | |
| Basil IV of Ohrid | Βασίλειος Δ΄, ὁ Ἀχρίδος | 1145–1168 | | |
| Eustathius | Εὐστάθιος, ὁ Κατάφλωρος | 1175–1197 ή 1198 | Saint | |
| Constantine III Mesopotamites | Κωνσταντῖνος Γ΄, ὁ Μεσοποταμίτης | 1198–1199 | | |
| Chrysanthus | Χρύσανθος | 1199–1202 | | |
| Constantine III Mesopotamites | Κωνσταντῖνος Γ΄,ὁ Μεσοποταμίτης | 1204–1224 | in exile; Thessaloniki under Latin control | |
| Nicetas III | Νικήτας Γ΄ | | | |
| Joseph II | Ἰωσὴφ Β΄ | 1232–1235 | | |
| Michael II Palatanos | Μιχαὴλ Β΄, ὁ Παλατάνος | 1235 | | |
| Manuel | Μανουὴλ | 1258–1261 | | |
| Joannicius Kydones | Ἰωαννίκιος, ὁ Κυδώνης | 1261 | | |
| Demetrius | Δημήτριος | 1282–1285 | | |
| Ignatius I | Ἰγνάτιος Α΄ | 1285–? | | |
| James I | Ἰάκωβος Α΄ | 1299 | | |
| Jeremy | Ἱερεμίας | 1315–1322 | | |
| Euphemianus | Εὐφημιανὸς | 1322 | | |
| John V Kalekas | Ἰωάννης Ε΄, ὁ Καλέκας | 1322–1334 | Patriarch of Constantinople | |
| Gregory II | Γρηγόριος Β’ | 1334 | | |
| Glabas | Γλαβᾶς | 1336–1341 | | |
| Macarius I | Μακάριος Α΄ | 1342–1346 | | |
| Gregory III Palamas | Γρηγόριος Γ΄, ὁ Παλαμᾶς | 1347–1359 | Saint | |
| Neilos Kabasilas | Νεῖλος, ὁ Καβάσιλας | 1360–1361 | Saint | |
| Nicholas II Kabasilas | Νικόλαος Β΄, ὁ Καβάσιλας | 1361–1363 | Saint | |
| Unknown | | 1363–1371 | | |
| Dorotheus II | Δωρόθεος Β΄ | 1371–1379 | | |
| Isidore II Glabas | Ἰσίδωρος Β΄, ὁ Γλαβᾶς | 1379–1393 | Saint; Thessaloniki under Ottoman control | |
| Gabriel I | Γαβριὴλ Α΄ | 1393–1410 | Saint; Thessaloniki returns to Byzantine control | |
| Symeon the Mystic | Συμεών, ὁ μυσταγωγός | 1410–1429 | Saint | |
| Gregory III | Γρηγόριος Γ΄ | 1430 | Thessaloniki finally under Ottoman control | |
| Nephon | Νήφων | 1450–1484 | Saint, Patriarch of Constantinople | |
| Macarius II | Μακάριος Β΄ | 1517–1536 | | |
| Theonas | Θεωνᾶς, ὁ ἀπὸ Ἡγουμένων | 1539 | Saint | |
| Theophanes II | Θεοφάνης Β΄ | 1544 | | |
| Gregory-David | Γρηγόριος–Δαβὶδ | | | |
| Joasaph I | Ἰωάσαφ Α΄ | 1560–1578 | | |
| Metrophanes | Μητροφάνης | 1585 | | |
| Gabriel II | Γαβριὴλ Β΄ | 1594 | Patriarch of Constantinople | |
| Matthew I | Ματθαῖος Α΄ | 1596 | | |
| Joasaph II Argyropoulos | Ἰωάσαφ Β΄, ὁ Ἀργυρόπουλος | 1596 | | |
| Sophronius I | Σωφρόνιος Α΄ | 1606 | | |
| Zosimas | Ζωσιμᾶς | 1607 | | |
| Parthenius | Παρθένιος | 1611 | | |
| Athanasios I | Ἀθανάσιος Α΄ | 1622–1634 | Saint, Patriarch of Constantinople | |
| Damascenus I | Δαμασκηνὸς Α΄ | 1634–1636 | | |
| Callinicus I | Καλλίνικος Α΄ | 1636–1639 | | |
| Theocletus | Θεόκλητος | 1645–1651 | | |
| Joachim I | Ἰωακεὶμ Α΄ | 1651–1666 | | |
| Dionysius | Διονύσιος | 1666–1671 | Patriarch of Constantinople | |
| Anastasius II | Ἀναστάσιος Β | 1671 | | |
| Meletius I | Μελέτιος Α΄ | 1672–1684 | | |
| Methodius | Μεθόδιος | 1687–1696 | | |
| Ignatius II | Ἰγνάτιος Β΄ | 1698–1712 | | |
| James II | Ἰάκωβος Β΄ | 1712 | | |
| Ignatius II | Ἰγνάτιος Β΄ | 1723 | | |
| Ananias | Ἀνανίας | 1728 | | |
| Joachim II | Ἰωακεὶμ Β΄ | 1734–1744 | | |
| Gabriel III | Γαβριὴλ Γ΄ | 1745–1752 | | |
| Spyridon | Σπυρίδων | 1760–1761 | | |
| Neophytus I | Νεόφυτος Α΄ | 1767 | | |
| Theodosius II | Θεοδόσιος Β΄ | 1767–1769 | Patriarch of Constantinople | |
| Damascenus II | Δαμασκηνὸς Β΄ | 1769–1780 | | |
| James III | Ἰάκωβος Γ΄ | 1780 | | |
| Gerasimus | Γεράσιμος | 1788–1815 | | |
| Joseph III the Hieromartyr | Ἰωσὴφ Γ΄, ὁ Ἱερομάρτυς | 1815–1821 | Saint | |
| Matthew II | Ματθαῖος Β΄ | 1821–1824 | | |
| Macarius III | Μακάριος Γ΄ | 1824–1830 | | |
| Meletius II | Μελέτιος Β΄ | 1830–1841 | Patriarch of Constantinople | |
| Hieronymus | Ἱερώνυμος | 1841–1853 | | |
| Callinicus II | Καλλίνικος Β΄ | 1853–1861 | Patriarch of Alexandria | |
| Neophytus II | Νεόφυτος Β΄ | 1861–1874 | | |
| Joachim III | Ἰωακεὶμ Γ΄ | 1874–1878 | Patriarch of Constantinople | |
| Callinicus III Fotiadis | Καλλίνικος Γ΄, ὁ Φωτιάδης | 1878–1884 | | |
| Gregory IV Kallidis | Γρηγόριος Δ΄, ὁ Καλλίδης | 1885–1889 | Saint | |
| Sophronius II | Σωφρόνιος Β΄ | 1889–1893 | | |
| Athanasius II Megaklis | Ἀθανάσιος Β΄, ὁ Μεγακλῆς | 1893–1903 | | |
| Alexander II Rigopoulos | Ἀλέξανδρος Β΄, ὁ Ῥηγόπουλος | 1903–1910 | | |
| Joachim IV Sgouros | Ἰωακεὶμ Δ΄, ὁ Σγουρὸς | 1910–1912 | | |
| Gennadios Alexiadis | Γεννάδιος, ὁ Ἀλεξιάδης | 1912–1951 | Thessaloniki comes under Greek control | |
| Panteleimon I Papageorgiou | Παντελεήμων Α΄, ὁ Παπαγεωργίου | 1951–1968 | | |
| Leonidas Paraskevopoulos | Λεωνίδας, ὁ Παρασκευόπουλος | 1968–1974 | | |
| Panteleimon II Chrysofakis | Παντελεήμων Β΄, ὁ Χρυσοφάκης | 1974–2003 | | |
| Anthimos Rousas | Ἄνθιμος, ὁ Ῥούσας | 2004–2023 | | |
| Filotheos Theocharis [el] | Φιλόθεος, ὁ Θεοχάρης | 2023 - | | |