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黃桿菌科

黄杆菌目的一科细菌 来自维基百科，自由的百科全书

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黃桿菌科（學名：Flavobacteriaceae）為黃桿菌目的一科細菌。此科的模式屬為黃桿菌屬(Flavobacterium)。黃桿菌科為環境細菌。[1][2] 大多數菌種是需氧的，而有些是微需氧甚至是厭氧的；例如二氧化碳嗜纖維菌屬（Capnocytophaga）和考諾尼亞菌屬（Coenonia）。[3]

快速預覽 黃桿菌科, 科學分類 ...
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下級分類

本科包括以下屬：[4]

  • Abyssalbus Xu et al. 2022
    • Abyssalbus ytuae Xu et al. 2022[5]
  • Actibacter Kim et al. 2008
  • Aegicerativicinus Huang et al. 2022
    • Aegicerativicinus sediminis Huang et al. 2022[6]
  • Aequorivita Bowman and Nichols 2002
    • Aequorivita aestuarii (Kim et al., 2010) Hahnke et al., 2017
    • Aequorivita antarctica Bowman & Nichols, 2002
    • Aequorivita aquimaris (Thevarajoo et al. 2016) García-López et al. 2020
    • Aequorivita capsosiphonis Park et al., 2009
    • Aequorivita crocea Bowman & Nichols, 2002
    • Aequorivita echinoideorum (Lin et al., 2015) Hahnke et al., 2017
    • Aequorivita lipolytica Bowman & Nichols, 2002
    • Aequorivita marisscotiae Liu et al. 2023[7]
    • Aequorivita nionensis (Rajasabapathy et al., 2015) Hahnke et al., 2017
    • Aequorivita sinensis Wang et al. 2020[8]
    • Aequorivita soesokkakensis (Park et al., 2014) Hahnke et al., 2017
    • Aequorivita sublithincola Bowman & Nichols, 2002
    • Aequorivita viscosa Liu et al., 2013
    • Aequorivita vitellina Wang et al. 2023[9]
    • Aequorivita vladivostokensis (Nedashkovskaya et al., 2003) Hahnke et al., 2017
    • Aequorivita xiaoshiensis Wang et al. 2023[9]
  • 潮汐桿菌屬 Aestuariibaculum Jeong et al. 2013
  • Aestuariicola Yoon et al. 2008，為Lutimonas Yang et al. 2007的異名
  • Aestuariimonas Park et al. 2018
    • Aestuariimonas insulae Park et al. 2018
  • Aestuariivivens Park et al. 2015
    • Aestuariivivens insulae Park et al. 2015
    • Aestuariivivens marinum Huang et al. 2023[10]
    • Aestuariivivens sediminicola Huang et al. 2023[10]
    • Aestuariivivens sediminis Huang et al. 2023[10]
  • 海藻桿菌屬 Algibacter Nedashkovskaya et al. 2004
  • Algitalea Yoon et al. 2015
    • Algitalea ulvae Yoon et al. 2015
  • Allomuricauda Deshmukh and Oren 2023[11]
    • Allomuricauda abyssi (Wang et al. 2022) Deshmukh and Oren 2023
    • Allomuricauda aequoris (Guo et al. 2020) Deshmukh and Oren 2023
    • Allomuricauda algicola (Kim et al. 2020) Deshmukh and Oren 2023
    • Allomuricauda alvinocaridis (Liu et al. 2020) Deshmukh and Oren 2023
    • Allomuricauda amoyensis (Li et al. 2019) Deshmukh and Oren 2023
    • Allomuricauda amphidinii (Chen et al. 2021) Deshmukh and Oren 2023
    • Allomuricauda antarctica (Wu et al. 2013) Deshmukh and Oren 2023
    • Allomuricauda aquimarina (Yoon et al. 2005) Deshmukh and Oren 2023
    • Allomuricauda aurantiaca (Liang et al. 2021) Deshmukh and Oren 2023
    • Allomuricauda aurea (Zhao et al. 2022) Deshmukh and Oren 2023
    • Allomuricauda beolgyonensis (Lee et al. 2012) Deshmukh and Oren 2023
    • Allomuricauda chongwuensis (Chen et al. 2022) Deshmukh and Oren 2023
    • Allomuricauda eckloniae (Bae et al. 2007) Deshmukh and Oren 2023
    • Allomuricauda flava (Yoon and Oh 2012) Deshmukh and Oren 2023
    • Allomuricauda flavescens (Yoon et al. 2005) Deshmukh and Oren 2023
    • Allomuricauda hadalis (Zhang et al. 2020) Deshmukh and Oren 2023
    • Allomuricauda hymeniacidonis (Park 2019) Deshmukh and Oren 2023
    • Allomuricauda indica (Zhang et al. 2018) Deshmukh and Oren 2023
    • Allomuricauda iocasae (Liu et al. 2018) Deshmukh and Oren 2023
    • Allomuricauda koreensis (García-López et al. 2020) Deshmukh and Oren 2023
    • Allomuricauda lutaonensis (Arun et al. 2009) Deshmukh and Oren 2023
    • Allomuricauda lutea (Wang et al. 2017) Deshmukh and Oren 2023
    • Allomuricauda lutimaris (Yoon et al. 2008) Deshmukh and Oren 2023
    • Allomuricauda marina (Su et al. 2017) Deshmukh and Oren 2023
    • Allomuricauda maritima (Guo et al. 2020) Deshmukh and Oren 2023
    • Allomuricauda nanhaiensis (Dang et al. 2019) Deshmukh and Oren 2023
    • Allomuricauda oceanensis (Guo et al. 2020) Deshmukh and Oren 2023
    • Allomuricauda oceani (Dong et al. 2020) Deshmukh and Oren 2023
    • Allomuricauda ochracea (Kim et al. 2020) Deshmukh and Oren 2023
    • Allomuricauda olearia (Hwang et al. 2009) Deshmukh and Oren 2023
    • Allomuricauda onchidii (Liang et al. 2021) Deshmukh and Oren 2023
    • Allomuricauda pacifica (Zhang et al. 2015) Deshmukh and Oren 2023
    • Allomuricauda parva (Liang et al. 2021) Deshmukh and Oren 2023
    • Allomuricauda profundi (Zhao et al. 2022) Deshmukh and Oren 2023
    • Allomuricauda ruestringensis (Bruns et al. 2001) Deshmukh and Oren 2023
    • Allomuricauda sediminis (Zhu et al. 2021) Deshmukh and Oren 2023
    • Allomuricauda spongiicola (Shin and Park 2023) Deshmukh and Oren 2023
    • Allomuricauda taeanensis (Kim et al. 2013) Deshmukh and Oren 2023
    • Allomuricauda zhangzhouensis (Yang et al. 2013) Deshmukh and Oren 2023
  • Amniculibacterium Chen et al. 2020
    • Amniculibacterium aquaticum Chen et al. 2020
  • Antarcticibacterium Li et al. 2018
    • Antarcticibacterium arcticum Lee et al. 2020
    • Antarcticibacterium flavum Li et al. 2018
  • Antarcticimonas Yang et al. 2014
    • Antarcticimonas flava Yang et al. 2014
  • Aquaticitalea Xamxidin et al. 2016
  • Aquibacter Hameed et al. 2014
  • 海水桿菌屬 Aquimarina Nedashkovskaya et al. 2005
  • Arcticiflavibacter Liu et al. 2016
  • 棲砂桿菌屬 Arenibacter Ivanova et al. 2001
  • Arenitalea Zhang et al. 2013
  • Ascidiimonas Yoon et al. 2016
  • Aurantiacicella Teramoto et al. 2016
  • Aurantibacter García-López et al. 2020
  • Aurantivirga Song et al. 2015
  • Aureibaculum Zhao et al. 2021
  • Aureicoccus Park et al. 2013
  • Aureisphaera Yoon et al. 2015
  • Aureitalea Park et al. 2012
  • Aureivirga Haber et al. 2013
  • 比茲奧氏菌屬 Bizionia Nedashkovskaya et al. 2005
  • 二氧化碳嗜纖維菌屬 Capnocytophaga Leadbetter et al. 1982
  • Cellulophaga Johansen et al. 1999
  • 長城站菌屬 Changchengzhania Wang et al. 2017
    • Changchengzhania lutea Wang et al. 2017[12]
  • 克里斯蒂安菌屬 Christiangramia Deshmukh and Oren 2023
  • Citreitalea Yoon et al. 2014，檸檬色桿菌屬
    • Citreitalea marina Yoon et al. 2014
  • 考諾尼亞菌屬 Coenonia Vandamme et al. 1999
  • Confluentibacter Park et al. 2016
    • Confluentibacter citreus Han et al. 2017
    • Confluentibacter flavum Li et al. 2018
    • Confluentibacter lentus Park et al. 2016
    • Confluentibacter sediminis Wei et al. 2019
  • Constantimarinum Yang et al. 2023
    • Constantimarinum furrinae Yang et al. 2023[13]
  • Corallibacter Kim et al. 2012
    • Corallibacter vietnamensis Kim et al. 2012
  • Costertonia Kwon et al. 2006
  • Croceibacter Cho and Giovannoni 2003
  • 藏紅花色纖細桿菌屬 Croceitalea Lee et al. 2008
  • 橘黃色桿菌屬 Croceivirga Hu et al. 2017
  • Daejeonia Siddiqi et al. 2017
  • 獨島菌屬 Dokdonia Yoon et al. 2005
  • 東海菌屬 Donghaeana Yoon et al. 2006，為Nonlabens Lau et al. 2005的異名
  • Eudoraea Alain et al. 2008
  • Euzebyella Lucena et al. 2010
    • Euzebyella algicola Kwon et al. 2018
    • Euzebyella marina Zhang et al. 2017
    • Euzebyella saccharophila Lucena et al. 2010
  • Faecalibacter Chen et al. 2020
    • Faecalibacter bovis Li et al. 2021
    • Faecalibacter macacae Chen et al. 2020
    • Faecalibacter rhinopitheci Wang et al. 2021
  • 鞭毛單胞菌屬 Flagellimonas Bae et al. 2007
  • 黃胞菌屬 Flavicella Teramoto and Nishijima, 2015
  • Flavihalobacter Yin et al. 2021，為Psychroserpens Bowman et al. 1997的異名
  • Flavimarina Nedashkovskaya et al., 2015
  • Flaviramulus Einen and Øvreås, 2006
    • Flaviramulus aestuariivivens Park et al. 2017
    • Flaviramulus aquimarinus Lee et al. 2015
    • Flaviramulus basaltis Einen and Øvreås 2006
    • Flaviramulus ichthyoenteri Zhang et al. 2013
    • Flaviramulus multivorans (Park et al. 2014) Liu et al. 2023[14]
  • Flavirhabdus Shakeela et al. 2015
  • 黃顏色桿菌屬 Flavivirga Yi et al. 2012
  • 黃桿菌屬 Flavobacterium Bergey et al. 1923
  • 華美菌屬 Formosa Ivanova et al. 2004
  • Frondibacter Yoon et al. 2015
  • Fulvibacter Khan et al. 2008
  • Gaetbulibacter Jung et al. 2005
  • Gaetbulimicrobium Yoon et al. 2006，為Aquimarina Nedashkovskaya et al. 2005的異名
  • Galbibacter Khan et al. 2007
    • Galbibacter marinus Li et al. 2013
    • Galbibacter mesophilus Khan et al. 2007
    • Galbibacter orientalis Wei et al. 2023[15]
    • Galbibacter pacificus Wei et al. 2023[15]
  • Gangjinia Lee et al. 2011
  • Gelatiniphilus Tang et al. 2016
  • 冰冷桿菌屬 Gelidibacter Bowman et al. 1997
  • Geojedonia Park et al. 2013
  • Gillisia Van Trappen et al. 2004
    • Gillisia hiemivivida Bowman and Nichols 2005
    • Gillisia illustrilutea Bowman and Nichols 2005
    • Gillisia limnaea Van Trappen et al. 2004
    • Gillisia lutea Vidal-Verdú et al. 2023[16]
    • Gillisia marina Roh et al. 2013
    • Gillisia mitskevichiae Nedashkovskaya et al. 2005
    • Gillisia myxillae Lee et al. 2006
    • Gillisia sandarakina Bowman and Nichols 2005
  • Gilvibacter Khan et al. 2007
  • 革蘭菌屬 Gramella Nedashkovskaya et al. 2005
  • 鹽黃桿菌屬 Haloflavibacter Feng et al. 2020
  • Hanstruepera Hameed et al. 2015
  • Hoppeia Kwon et al. 2014
  • Hwangdonia Jung et al. 2013
  • 李玄順菌屬 Hyunsoonleella Yoon et al. 2010
  • Ichthyenterobacterium Shakeela et al. 2015
  • Imtechella Surendra et al. 2012
  • Jejudonia Park et al. 2013
  • Jejuia Lee et al. 2009
  • 蘇特氏菌屬 Joostella Quan et al. 2008
  • 科迪亞菌屬 Kordia Sohn et al. 2004
  • Kriegella Nedashkovskaya et al. 2008
  • Krokinobacter Khan et al. 2006，為Dokdonia Yoon et al. 2005的異名
  • 湖養菌屬 Lacinutrix Bowman and Nichols 2005
  • 萊文虎克菌屬 Leeuwenhoekiella Nedashkovskaya et al. 2005
  • Leptobacterium Mitra et al. 2009
  • Litoribaculum Jin and Jeon 2015
  • Lutaonella Arun et al. 2009
  • 淤泥桿菌屬 Lutibacter Choi and Cho 2006
  • Lutimonas Yang et al. 2007
    • Lutimonas halocynthiae Kim et al. 2014
    • Lutimonas saemankumensis (Yoon et al. 2008) Kim et al. 2014
    • Lutimonas vermicola Yang et al. 2007
    • Lutimonas zeaxanthinifaciens Jung et al. 2024
  • 紅樹林單胞菌屬 Mangrovimonas Li et al. 2013
  • 棲海桿菌屬 Maribacter Nedashkovskaya et al. 2004
  • Mariniflexile Nedashkovskaya et al. 2006
    • Mariniflexile aquimaris Jung et al., 2012
    • Mariniflexile fucanivorans Barbeyron et al., 2008
    • Mariniflexile gromovii Nedashkovskaya et al., 2006
    • Mariniflexile jejuense Jung & Yoon, 2013
    • Mariniflexile maritimum Ko et al. 2021[17]
    • Mariniflexile ostreae Park et al., 2015
    • Mariniflexile soesokkakense Park et al., 2014
  • Marinirhabdus Wu et al. 2016
  • Marinivirga Park et al. 2013
  • Maripseudobacter Chen et al. 2017，異名
  • Maritimimonas Park et al. 2009
  • Marixanthomonas Romanenko et al. 2007
  • Marixanthotalea Fu et al. 2023
    • Marixanthotalea marina Fu et al. 2023[18]
  • Meridianimaribacter Wang et al. 2010
  • Mesoflavibacter Asker et al. 2008
  • 中度喜鹽桿菌屬 Mesohalobacter Feng et al. 2020
  • 海研站菌屬 Mesonia Nedashkovskaya et al. 2003
  • 鼠尾菌屬 Muricauda Bruns et al. 2001
  • Muriicola Kahng et al. 2010
    • Muriicola jejuensis Kahng et al., 2010
    • Muriicola marianensis Hu et al., 2015
    • Muriicola soli Kang et al. 2021[19]
  • 類香味菌屬 Myroides Vancanneyt et al. 1996
  • Namhaeicola Jung et al. 2012
  • Neptunitalea Yoon and Kasai 2015
    • Neptunitalea chrysea Yoon and Kasai 2015[20]
  • Nonlabens Lau et al. 2005
  • Oceanihabitans Zhang et al. 2016
  • Olleya Mancuso Nichols et al. 2005
  • Paenimyroides Zhang et al. 2023
    • Paenimyroides aestuarii Zhang et al. 2023[21]
    • Paenimyroides anatoliense (Kacagan et al. 2013) Zhang et al. 2023，也拼作：Paenimyroides anatoliensis
    • Paenimyroides aquimaris (García-López et al. 2020) Zhang et al. 2023
    • Paenimyroides baculatum (Chhetri et al. 2021) Zhang et al. 2023
    • Paenimyroides ceti (Vela et al. 2007) Zhang et al. 2023
    • Paenimyroides cloacae (Liu et al. 2017) Zhang et al. 2023
    • Paenimyroides naphthae (Chaudhary and Kim 2018) Zhang et al. 2023
    • Paenimyroides tangerinum (Li et al. 2020) Zhang et al. 2023
    • Paenimyroides ummariense (Lata et al. 2012) Zhang et al. 2023
    • Paenimyroides viscosum (Li et al. 2020) Zhang et al. 2023
  • 副研站菌屬 Paramesonia Wang et al. 2020
  • Pareuzebyella Huang et al. 2021
  • Patiriisocius Kawano et al. 2020
    • Patiriisocius marinus
    • Patiriisocius marinistellae Kawano et al. 2020[22]
  • Paucihalobacter Wu et al. 2020
  • Pelagihabitans Wang et al. 2020
  • Persicivirga O'Sullivan et al. 2006，為Nonlabens Lau et al. 2005的異名
  • Pibocella Nedashkovskaya et al. 2005
  • Planktosalinus Zhong et al. 2016
  • 極地桿菌屬 Polaribacter Gosink et al. 1998
  • Pontimicrobium Janthra et al. 2020
  • Pontirhabdus Yi et al. 2011，為Algibacter Nedashkovskaya et al. 2004的異名
  • 喜濱珊瑚菌屬 Poritiphilus Wang et al. 2020
  • Postechiella Lee et al. 2012
  • Pricia Yu et al. 2012
  • Pseudalgibacter Li et al. 2022
    • Pseudalgibacter alginicilyticus (Sun et al. 2016) Li et al. 2022[23]
  • Pseudobizionia Park et al. 2018
  • Pseudofulvibacter Yoon et al. 2013
  • 偽黏著桿菌屬 Pseudotenacibaculum Huang et al. 2016
  • Pseudozobellia Nedashkovskaya et al. 2009
  • 冷彎曲菌屬 Psychroflexus Bowman et al. 1999
  • 冷蛇菌屬 Psychroserpens Bowman et al. 1997
  • Pustulibacterium Wang et al. 2013
  • Robertkochia Hameed et al. 2014
  • Robiginitalea Cho and Giovannoni 2004
    • Robiginitalea aestuariiviva Cao et al. 2023[24]
    • Robiginitalea aurantiaca Zhou et al. 2023
    • Robiginitalea biformata Cho and Giovannoni 2004
    • Robiginitalea marina Xuan et al. 2023
    • Robiginitalea myxolifaciens Manh et al. 2008
    • Robiginitalea sediminis Zhang et al. 2020
  • Sabulilitoribacter Park et al. 2014
  • 需鹽桿菌屬 Salegentibacter McCammon and Bowman 2000
  • 鹽坑微菌屬 Salinimicrobium Lim et al. 2008
  • Sandarakinotalea Khan et al. 2006，為Nonlabens Lau et al. 2005的異名
  • Saonia Fagervold et al. 2017
  • Sediminibacter Khan et al. 2007
  • 棲沉積物桿菌屬 Sediminicola Khan et al. 2006
  • 西南海棲菌屬 Seonamhaeicola Park et al. 2014
  • Siansivirga Hameed et al. 2013
  • 中華微桿菌屬 Sinomicrobium Xu et al. 2013
  • Snuella Yi and Chun 2011
  • Spongiibacterium Yoon and Oh 2012，為'Flagellimonas Bae et al. 2007的異名
  • Spongiiferula Yoon et al. 2016
  • Spongiimicrobium Yoon et al. 2016
  • Spongiivirga Yoon et al. 2015
  • Stanierella Nedashkovskaya et al. 2005，為Aquimarina Nedashkovskaya et al. 2005的異名
  • Stenothermobacter Lau et al. 2006，為Nonlabens Lau et al. 2005的異名
  • Subsaxibacter Bowman and Nichols, 2005
  • Subsaximicrobium Bowman and Nichols, 2005
  • Sungkyunkwania Yoon et al. 2013
    • Sungkyunkwania multivorans Yoon et al. 2013[25]
  • Taeania Jung et al. 2016
  • 濟州島古名菌屬 Tamlana Lee 2007
  • 黏著桿菌屬 Tenacibaculum Suzuki et al. 2001
  • Thermobacterium Chen et al. 2023
    • Thermobacterium salinum Chen et al. 2023[26]
  • Ulvibacter Nedashkovskaya et al. 2004
  • Ulvibacterium Zhang et al. 2021
  • Urechidicola Shin and Yi 2020
  • Vitellibacter Nedashkovskaya et al. 2003，為Aequorivita Bowman and Nichols 2002的異名
  • Wangia Qin et al. 2007，為王祖農菌屬 （Zunongwangia Qin et al. 2007）的異名
  • 莊文穎氏菌屬 Wenyingzhuangia Liu et al. 2014
  • 維諾格拉斯基氏菌屬 Winogradskyella Nedashkovskaya et al. 2005
  • 臥蠶菌屬 Wocania He et al. 2020
  • Xanthomarina Vaidya et al. 2015
    • Xanthomarina gelatinilytica Vaidya et al. 2015
    • Xanthomarina spongicola (Yoon and Oh 2011) García-López et al. 2020
  • Yeosuana Kwon et al. 2006
    • Yeosuana aromativorans Kwon et al., 2006
    • Yeosuana marina Zhang et al. 2020[27]
  • Zeaxanthinibacter Asker et al. 2007
    • Zeaxanthinibacter aestuarii Lee et al. 2016
    • Zeaxanthinibacter enoshimensis Asker et al. 2007
  • 周氏菌屬 Zhouia Liu et al. 2006，周培瑾氏菌，以中科院微生物研究所研究員周培瑾的名字命名
    • Zhouia amylolytica Liu et al. 2006
    • Zhouia spongiae Zhuang et al. 2018
  • Zobellia Barbeyron et al. 2001
    • Zobellia alginiliquefaciens Barbeyron et al. 2023[28]
    • Zobellia amurskyensis Nedashkovskaya et al. 2004
    • Zobellia barbeyronii Nedashkovskaya et al. 2022
    • Zobellia galactanivorans corrig. Barbeyron et al. 2001
    • Zobellia galactanovorans Barbeyron et al. 2001
    • Zobellia laminariae Nedashkovskaya et al. 2004
    • Zobellia nedashkovskayae Barbeyron et al. 2021
    • Zobellia roscoffensis Barbeyron et al. 2021
    • Zobellia russellii Nedashkovskaya et al. 2004
    • Zobellia uliginosa (ZoBell and Upham 1944) Barbeyron et al. 2001
  • 王祖農菌屬 Zunongwangia Qin et al. 2007
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