Subclass, order, superfamily incertae sedis
- Family †Archaeocardiidae
- Family †Camyidae
- Family †Cardiolariidae
- Family †Cirravidae
- Family †Fordillidae
- Family †Laurskiidae
- Family †Thoraliidae
- Family †Tuarangiidae
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- Superfamily †Beichuanioidea Liu & Gu, 1988
- Family †Beichuaniidae Liu & Gu, 1988
- Superfamily †Megatrigonioidea Van Hoepen, 1929
- Family †Iotrigoniidae Savelive, 1958
- Family †Megatrigoniidae Van Hoepen, 1929
- Family †Rutitrigoniidae Van Hoepen, 1929
- Superfamily Myophorelloidea Kobayashi, 1954
- Family †Buchotrigoniidae Leanza, 1993
- Family †Laevitrigoniidae Savelive, 1958
- Family †Myophorellidae Kobayashi, 1954
- Family †Vaugoniidae Kobayashi, 1954
- Superfamily Trigonioidea Lamarck, 1819
- Family †Eoschizodidae Newell & Boyd, 1975 (syn: Curtonotidae)
- Family †Groeberellidae Pérez, Reyes, & Danborenea 1995
- Family †Myophoriidae Bronn, 1849 (syn: Cytherodontidae, Costatoriidae, Gruenewaldiidae)
- Family †Prosogyrotrigoniidae Kobayashi, 1954
- Family †Scaphellinidae Newell & Ciriacks, 1962
- Family †Schizodidae Newell & Boyd, 1975
- Family †Sinodoridae Pojeta & Zhang, 1984
- Family Trigoniidae Lamarck, 1819
- Superfamily †Archanodontoidea Modell, 1957 (placement in Unionoida uncertain)
- Family †Archanodontidae Modell, 1957
- Superfamily incertae sedis
- Family †Desertellidae
- Family †Trigonodidae
- Family †Utschamiellidae
- Superfamily Etherioidea Deshayes, 1832
- Superfamily Hyrioidea Swainson, 1840
- Superfamily †Trigonioidoidea Cox, 1952
- Family †Jilinoconchidae Ma, 1989 (placement uncertain)
- Family †Nakamuranaiadidae Guo, 1981 (syn:Sinonaiinae, Nippononaiidae)
- Family †Plicatounionidae Chen, 1988
- Family †Pseudohyriidae Kobayashi, 1968
- Family †Sainschandiidae Kolesnikov, 1977
- Family †Trigonioididae Cox, 1952
- Superfamily Unionoidea Rafinesque, 1820
- Family Liaoningiidae Yu & Dong, 1993 (placement uncertain)
- Family Margaritiferidae Henderson, 1929 (syn:Margaritaninae, Cumberlandiinae, Promargaritiferidae)
- Family †Sancticarolitidae Simone & Mezzalira, 1997
- Family Unionidae Rafinesque, 1820
Order and superfamily incertae sedis
- Family †Afghanodesmatidae
- Family †Antactinodiontidae
- Family †Ctenodontidae
- Family †Eritropidae
- Family †Pseudocryrtodontidae
- Family †Tironuculidae
Subclass Autobranchia
Superorder, order and superfamily incertae sedis
- Family †Cercomyidae
- Family †Palaeocardiidae
- Family †Pucamyidae
Order incertae sedis
- Family †Amnigeniidae
- Family †Lipanellidae
- Family †Palaeomutelidae
Superorder Nepiomorphia
Order †Antipleurida
- Superfamily †Dualinoidea
- Family †Dualinidae
- Family †Spanilidae
- Family †Stolidotidae
- Superfamily †Praecardioidea
- Family †Buchiolidae
- Family †Praecardiidae
- Superfamily †Cardioloidea
- Family †Cardiolidae
- Family †Slavidae
Order and superfamily incertae sedis
- Family †Eligmidae
- Family †Evyanidae
- Family †Ischyrodontidae
- Family †Limatulinidae
- Family †Matheriidae
- Family †Myodakryotidae
- Family †Pichleridae
- Family †Rhombopteriidae
- Superfamily incertae sedis
- Superfamily Arcoidea
- Superfamily Limopsoidea
Order Cyrtodontida
- Superfamily †Cyrtodontoidea
- Family †Cyrtodontidae
- Family †Ptychodesmatidae
- Superfamily †Falcatodontoidea
- Superfamily †Modiolopsoidea
- Family †Colpomyidae
- Family †Modiolopsidae
- Family †Saffordiidae
- Superfamily Mytiloidea
- Superfamily incertae sedis
- Family †Euchondriidae
- Family †Praeostreidae
- Family †Prospondylidae
- Family †Saharopteriidae
- Family †Vlastidae
- Superfamily Anomioidea
- Superfamily †Aulacomyelloidea
- Family †Aulacomyellidae
- Family †Bositridae
- Superfamily †Aviculopectinoidea
- Family †Aviculopectinidae
- Family †Deltopectinidae
- Superfamily †Buchioidea
- Family †Buchiidae
- Family †Eurydesmatidae
- Superfamily †Chaenocardioidea
- Family †Chaenocardiidae
- Family †Binipectinidae
- Family †Streblochondriidae
- Superfamily Dimyoidea
- Superfamily †Heteropectinoidea
- Family †Acanthopectinidae
- Family †Annuliconchidae
- Family †Heteropectinidae
- Family †Limpectinidae
- Superfamily †Halobioidea
- Family †Claraiidae
- Family †Daonellidae
- Family †Halobiidae
- Superfamily †Leiopectinoidea
- Superfamily †Monotoidea
- Family †Dolponellidae
- Family †Monotidae
- Superfamily †Oxytomoidea
- Family †Otapiriidae
- Family †Oxytomidae
- Superfamily Pectinoidea
- Superfamily Plicatuloidea
- Superfamily †Pseudomonotoidea
- Family †Hunanopectinidae
- Family †Pseudomonotidae
- Family †Terquemiidae
- Superfamily †Pterinopectinoidea
- Family †Natalissimidae
- Family †Pterinopectinidae
- Superfamily †Ambonychioidea
- Family †Ambonychiidae
- Family †Abiellidae
- Family †Alatoconchidae
- Family †Inoceramidae
- Family †Kinerkaellidae
- Family †Lunulacardiidae
- Family †Lunulacardiidae
- Family †Manticulidae
- Family †Monopteriidae
- Family †Myalinidae
- Family †Prokopievskiidae
- Family †Ramonalinidae
- Superfamily Pinnoidea
- Superfamily Pterioidea
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