AtpB RNA motif

The atpB RNA motif is a conserved RNA structure that was discovered by bioinformatics.^[1] atpB motifs are found in Corynebacteriaceae.

atpB
Consensus secondary structure and sequence conservation of atpB RNA
Identifiers
Symbol	atpB
Rfam	RF02916
Other data
RNA type	Cis-reg
SO	SO:0005836
PDB structures	PDBe

These RNAs are consistently located upstream of atpB genes, which encode a protein that is part of ATP synthase. Therefore, it is possible that atpB RNAs regulate these genes as cis-regulatory elements.