MethBase

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MethBase is a database of DNA methylation data derived from next-generation sequencing data.[1] MethBase provides a visualization of publicly available bisulfite sequencing and reduced representation bisulfite sequencing experiments through the UCSC Genome Browser. MethBase contents include single-CpG site resolution methylation levels for each CpG site in the genome of interest, annotation of regions of hypomethylation often associated with gene promoters, and annotation of allele-specific methylation associated with genomic imprinting.

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MethBase
Content
DescriptionDatabase for single cytosine resolution DNA methylation data and associated annotations.
OrganismsHuman
Chimpanzee
Gorilla
Rhesus Macaque
Mouse
Arabidopsis
Contact
LaboratoryAndrew D. Smith
Primary citationQiang Song et al. (2013) [1]
Release date2013
Access
Data formatTrackhub on the UCSC Genome Browser
Websitehttp://smithlabresearch.org/software/methbase/
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