Turnip crinkle virus (TCV) repressor of minus strand synthesis H5

The TCV hairpin 5 (H5) is an RNA element found in the turnip crinkle virus. This RNA element is composed of a stem-loop that contains a large symmetrical internal loop (LSL). H5 can repress minus-strand synthesis when the 3' side of the LSL pairs with the 4 bases at the 3'-terminus of the RNA(GCCC-OH).^[1][2]

Turnip crinkle virus (TCV) repressor of minus strand synthesis H5
Predicted secondary structure and sequence conservation of TCV_H5
Identifiers
Symbol	TCV_H5
Rfam	RF00500
Other data
RNA type	Cis-reg
Domain(s)	Viruses
SO	SO:0000233
PDB structures	PDBe

See also

• Turnip crinkle virus (TCV) core promoter hairpin (Pr)
• Turnip crinkle virus (TCV) hairpin H4