HDLBP

Vigilin is a 110 kDa protein that in humans is encoded by the HDLBP gene.^[5][6][7]

HDLBP
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 1VIG, 1VIH, 2CTE, 2CTF, 2CTJ, 2CTK, 2CTL, 2CTM
Identifiers
Aliases	HDLBP, HBP, PRO2900, VGL, high density lipoprotein binding protein
External IDs	OMIM: 142695; MGI: 99256; HomoloGene: 38035; GeneCards: HDLBP; OMA:HDLBP - orthologs
Gene location (Human) Chr. Chromosome 2 (human)[1] Band 2q37.3 Start 241,227,264 bp[1] End 241,317,061 bp[1]
Gene location (Mouse) Chr. Chromosome 1 (mouse)[2] Band 1 D|1 47.24 cM Start 93,333,662 bp[2] End 93,406,537 bp[2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in stromal cell of endometrium body of pancreas Achilles tendon anterior pituitary left testis epithelium of colon right testis right lobe of thyroid gland muscle of thigh body of stomach Top expressed in tail of embryo lacrimal gland genital tubercle calvaria salivary gland parotid gland molar muscle of thigh gastrula ankle More reference expression data BioGPS More reference expression data
Gene ontology Molecular function protein binding lipid binding nucleic acid binding RNA binding cadherin binding Cellular component plasma membrane nucleus high-density lipoprotein particle cytoplasm cytosol Biological process lipid metabolism steroid metabolic process lipid transport cholesterol metabolic process high-density lipoprotein particle clearance transport Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 3069 110611 Ensembl ENSG00000115677 ENSMUSG00000034088 UniProt Q00341 Q8VDJ3 RefSeq (mRNA) NM_001243900 NM_005336 NM_203346 NM_001320965 NM_001320966 NM_001320967 NM_001301364 NM_133808 NM_001357556 RefSeq (protein) NP_001230829 NP_001307894 NP_001307895 NP_001307896 NP_005327 NP_976221 NP_001288293 NP_598569 NP_001344485 Location (UCSC) Chr 2: 241.23 – 241.32 Mb Chr 1: 93.33 – 93.41 Mb PubMed search [3] [4]
Wikidata
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