List of rodents - Wikiwand

Rodents are animals that gnaw with two continuously growing incisors. Forty percent of mammal species are rodents, and they inhabit every continent except Antarctica.

This list contains circa 2,700 species in 518 genera in the order Rodentia.^[1]

Suborder Hystricomorpha

Family Petromuridae

Genus Petromus
- Petromus antiquus (extinct)
- Petromus minor (extinct)
- Petromus typicus - Dassie rat

Family Thryonomyidae

Genus Thryonomys
- Thryonomys asakomae (extinct)
- Thryonomys gregorianus - Lesser cane rat
- Thryonomys swinderianus - Greater cane rat

Family Erethizontidae

Subfamily Chaetomyinae

Genus Chaetomys
- Chaetomys subspinosus - Bristle-spined rat

Subfamily Erethizontinae

Genus Coendou
- Coendou baturitensis - Baturite porcupine
- Coendou bicolor - Bicolored-spined porcupine
- Coendou ichillus - Streaked dwarf porcupine
- Coendou insidiosus - Bahia porcupine
- Coendou longicaudatus - Amazonian long-tailed porcupine
- Coendou melanurus - Black-tailed hairy dwarf porcupine
- Coendou mexicanus - Mexican hairy dwarf porcupine
- Coendou nycthemera - Black dwarf porcupine
- Coendou prehensilis - Brazilian porcupine
- Coendou pruinosus - Frosted hairy dwarf porcupine
- Coendou quichua - Andean porcupine
- Coendou roosmalenorum - Roosmalen's dwarf porcupine
- Coendou rothschildi? - Rothschild's porcupine
- Coendou rufescens - Stump-tailed porcupine
- Coendou sanctamartae - Santa Marta porcupine
- Coendou speratus - Pernambuco dwarf porcupine
- Coendou spinosus - Paraguaian hairy dwarf porcupine
- Coendou vestitus - Brown hairy dwarf porcupine
Genus Erethizon
- Erethizon bathygnathum (extinct)
- Erethizon cascoensis (extinct)
- Erethizon dorsatum - North American porcupine
- Erethizon kleini (extinct)
- Erethizon poyeri (extinct)

Family Chinchillidae

Genus Chinchilla
- Chinchilla chinchilla - Short-tailed chinchilla
- Chinchilla lanigera - Long-tailed chinchilla
Genus Lagidium
- Lagidium ahuacaense - Ecuadorean mountain viscacha
- Lagidium peruanum - Northern viscacha
- Lagidium viscacia - Southern viscacha
- Lagidium wolffsohni - Wolffsohn's viscacha
Genus Lagostomus
- Lagostomus crassus? (extinct)
- Lagostomus maximus - Plains viscacha
- Lagostomus telenkechanum (extinct)

Family Dinomyidae

Genus Dinomys
- Dinomys branickii - Pacarana

Family Caviidae

Subfamily Caviinae

Genus Cavia
- Cavia anolaimae?
- Cavia aperea - Brazilian guinea pig
- Cavia fulgida - Shiny guinea pig
- Cavia guianae?
- Cavia intermedia - Santa Catarina's guinea pig
- Cavia magna - Greater guinea pig
- Cavia patzelti? - Sacha guinea pig
- Cavia porcellus - Domestic guinea pig
- Cavia tschudii - Montane guinea pig
Genus Galea
- Galea comes - Southern highland yellow-toothed cavy
- Galea flavidens - Brandt's yellow-toothed cavy
- Galea leucoblephara - Lowland yellow-toothed cavy
- Galea monasteriensis? - Muenster yellow-toothed cavy
- Galea musteloides - Common yellow-toothed cavy
- Galea spixii - Spix's yellow-toothed cavy
Genus Microcavia
- Microcavia australis - Southern mountain cavy
- Microcavia jayat - Jayat's mountain cavy
- Microcavia maenas - Thomas's mountain cavy
- Microcavia niata - Andean mountain cavy
- Microcavia shiptoni - Shipton's mountain cavy
- Microcavia sorojchi - Sorojchi mountain cavy

Subfamily Dolichotinae

Genus Dolichotis
- Dolichotis patagonum - Patagonian mara
Genus Pediolagus
- Pediolagus salinicola - Chacoan mara

Subfamily Hydrochoerinae

Genus Hydrochoerus
- Hydrochoerus ballesterensis (extinct)
- Hydrochoerus gaylordi (extinct)
- Hydrochoerus hesperotiganites (extinct)
- Hydrochoerus hydrochaeris - Capybara
- Hydrochoerus isthmius - Lesser capybara
Genus Kerodon
- Kerodon acrobata - Acrobatic cavy
- Kerodon rupestris - Rock cavy

Family Dasyproctidae

Genus Dasyprocta
- Dasyprocta azarae - Azara's agouti
- Dasyprocta coibae - Coiban agouti
- Dasyprocta cristata - Crested agouti
- Dasyprocta fuliginosa - Black agouti
- Dasyprocta guamara - Orinoco agouti
- Dasyprocta kalinowskii - Kalinowski agouti
- Dasyprocta leporina - Red-rumped agouti
- Dasyprocta mexicana - Mexican agouti
- Dasyprocta prymnolopha - Black-rumped agouti
- Dasyprocta punctata - Central American agouti
- Dasyprocta ruatanica - Ruatan Island agouti
Genus Myoprocta
- Myoprocta acouchy - Red acouchi
- Myoprocta pratti - Green acouchi

Family Cuniculidae

Genus Cuniculus
- Cuniculus hernandezi?
- Cuniculus paca - Lowland paca
- Cuniculus taczanowskii - Mountain paca

Family Ctenomyidae

Genus Ctenomys
- Ctenomys andersoni - Anderson's cujuchi
- Ctenomys argentinus - Argentine tuco-tuco
- Ctenomys australis - Southern tuco-tuco
- Ctenomys azarae? - Azara's tuco-tuco
- Ctenomys bergi - Berg's tuco-tuco
- Ctenomys bidaui - Bidau's tuco-tuco
- Ctenomys boliviensis - Bolivian tuco-tuco
- Ctenomys bonettoi - Bonetto's tuco-tuco
- Ctenomys brasiliensis - Brazilian tuco-tuco
- Ctenomys budini? - Budin's tuco-tuco
- Ctenomys colburni - Colburn's tuco-tuco
- Ctenomys coludo - Puntilla tuco-tuco
- Ctenomys conoveri - Conover's tuco-tuco
- Ctenomys contrerasi - Contreras's tuco-tuco
- Ctenomys coyhaiquensis - Coyhaique tuco-tuco
- Ctenomys dorbignyi - D'Orbigny's tuco-tuco
- Ctenomys dorsalis - Chacoan tuco-tuco
- Ctenomys erikacuellarae - Erika's tuco-tuco
- Ctenomys emilianus - Emily's tuco-tuco
- Ctenomys famosus - Famatina tuco-tuco
- Ctenomys flamarioni - Flamarion's tuco-tuco
- Ctenomys fochi - Foch's tuco-tuco
- Ctenomys fodax - Lago Blanco tuco-tuco
- Ctenomys frater - Reddish tuco-tuco
- Ctenomys fulvus - Tawny tuco-tuco
- Ctenomys goodfellowi - Goodfellow's tuco-tuco
- Ctenomys haigi - Haig's tuco-tuco
- Ctenomys ibicuiensis - Ibicui tuco-tuco
- Ctenomys johannis - San Juan tuco-tuco
- Ctenomys juris - Jujuy tuco-tuco
- Ctenomys knighti - Catamarca tuco-tuco
- Ctenomys lami - Lami tuco-tuco
- Ctenomys latro - Mottled tuco-tuco
- Ctenomys lessai - Lessa's tuco-tuco
- Ctenomys leucodon - White-toothed tuco-tuco
- Ctenomys lewisi - Lewis' tuco-tuco
- Ctenomys magellanicus - Magellanic tuco-tuco
- Ctenomys maulinus - Maule tuco-tuco
- Ctenomys mendocinus - Mendoza tuco-tuco
- Ctenomys minutus - Tiny tuco-tuco
- Ctenomys nattereri - Natterer's tuco-tuco
- Ctenomys occultus - Furtive tuco-tuco
- Ctenomys opimus - Highland tuco-tuco
- Ctenomys osvaldoreigi - Reig's tuco-tuco
- Ctenomys pearsoni - Pearson's tuco-tuco
- Ctenomys perrensi - Goya tuco-tuco
- Ctenomys peruanus - Peruvian tuco-tuco
- Ctenomys pilarensis - Pilar tuco-tuco
- Ctenomys pontifex - San Luis tuco-tuco
- Ctenomys porteousi? - Porteous' tuco-tuco
- Ctenomys pundti - Pundt's tuco-tuco
- Ctenomys rionegrensis - Rio Negro tuco-tuco
- Ctenomys roigi - Roig's tuco-tuco
- Ctenomys saltarius - Salta tuco-tuco
- Ctenomys scagliai - Scaglia's tuco-tuco
- Ctenomys sericeus - Silky tuco-tuco
- Ctenomys sociabilis - Social tuco-tuco
- Ctenomys steinbachi - Steinbach's tuco-tuco
- Ctenomys sylvanus - Forest tuco-tuco
- Ctenomys talarum - Talas tuco-tuco
- Ctenomys thalesi - Thales's tuco-tuco
- Ctenomys torquatus - Collared tuco-tuco
- Ctenomys tuconax - Robust tuco-tuco
- Ctenomys tucumanus - Tucuman tuco-tuco
- Ctenomys tulduco - Sierra Tontal tuco-tuco
- Ctenomys validus - Strong tuco-tuco
- Ctenomys viarapaensis (extinct)
- Ctenomys viperinus - Vipos tuco-tuco
- Ctenomys yatesi - Yates's tuco-tuco
- Ctenomys yolandae - Yolanda's tuco-tuco

Family Octodontidae

Genus Aconaemys
- Aconaemys fuscus - Chilean rock rat
- Aconaemys porteri - Porter's rock rat
- Aconaemys sagei - Sage's rock rat
Genus Octodon
- Octodon bridgesi - Bridge's degu
- Octodon degus - Common degu
- Octodon lunatus - Moon-toothed degu
- Octodon pacificus - Isla Mocha degu
- Octodon ricardojeda - Ricardo Ojeda's degu
Genus Octodontomys
- Octodontomys gliroides - Mountain degu
Genus Octomys
- Octomys mimax - Mountain viscacha-rat
Genus Pipanacoctomys
- Pipanacoctomys aureus - Golden viscacha-rat
Genus Spalacopus
- Spalacopus cyanus - Coruro
Genus Tympanoctomys
- Tympanoctomys barrerae - Plains viscacha-rat
- Tympanoctomys cordubensis (extinct)
- Tympanoctomys kirchnerorum - Kirchner's viscacha rat
- Tympanoctomys loschalchalerosorum - Los Chalchaleros' viscacha-rat

Family Abrocomidae

Genus Abrocoma
Genus Cuscomys
- Cuscomys ashanika - Asháninka arboreal chinchilla rat
- Cuscomys oblativus - Machu Picchu arboreal chinchilla rat

Family Echimyidae

Subfamily Dactylomyinae

Genus Dactylomys
- Dactylomys boliviensis - Bolivian bamboo rat
- Dactylomys dactylinus - Amazon bamboo rat
- Dactylomys peruanus - Peruvian bamboo rat
Genus Kannabateomys
- Kannabateomys amblyonyx - southern bamboo rat
Genus Olallamys
- Olallamys albicauda - white-tailed olalla rat
- Olallamys edax - greedy olalla rat

Subfamily Echimyinae

Genus Callistomys
- Callistomys pictus - painted tree rat
Genus Diplomys

- Diplomys caniceps - Colombian soft-furred spiny rat
- Diplomys labilis - rufous soft-furred spiny-rat
Genus Echimys
- Echimys chrysurus - white-faced tree rat
- Echimys saturnus - dark tree rat
- Echimys vieirai - Vieira's spiny tree-rat
Genus Hoplomys
- Hoplomys gymnurus - Armored rat
Genus Isothrix
- Isothrix barbarabrownae - Barbara Brown's brush-tailed rat
- Isothrix bistriata - yellow-crowned brush-tailed rat
- Isothrix negrensis - Rio Negro brush-tailed rat
- Isothrix pagurus - plain brush-tailed rat
- Isothrix sinnamariensis - Sinnamary brush-tailed rat
Genus Makalata
- Makalata didelphoides - armored spiny rat
- Makalata macrura - Long-tailed armored tree-rat
- Makalata obscura - Dusky spiny tree-rat
- Makalata rhipidura - Peruvian armored tree-rat
Genus Pattonomys
- Pattonomys occasius - Bare-tailed armored tree-rat
- Pattonomys semivillosus - speckled tree rat
Genus Phyllomys
- Phyllomys blainvilii - Golden Atlantic tree-rat
- Phyllomys brasiliensis- Orange-brown Atlantic tree-rat
- Phyllomys dasythrix - Drab Atlantic tree-rat
- Phyllomys kerri - Kerr's Atlantic tree-rat
- Phyllomys lamarum - Pallid Atlantic tree-rat
- Phyllomys lundi - Lund's Atlantic tree-rat
- Phyllomys mantiqueirensis - Mantiqueira Atlantic tree-rat
- Phyllomys medius - Long-furred Atlantic tree-rat
- Phyllomys nigrispinus - black-spined Atlantic tree rat
- Phyllomys pattoni - Rusty-sided Atlantic tree-rat
- Phyllomys sulinus - Southern Atlantic tree-rat
- Phyllomys thomasi - Giant Atlantic tree-rat
- Phyllomys unicolor - Short-furred Atlantic tree-rat
Genus Santamartamys
- Santamartamys rufodorsalis - Red-crested tree-rat
Genus Toromys
- Toromys grandis - Giant tree-rat

Subfamily Eumysopinae

Genus Carterodon
- Carterodon sulcidens - Owl's spiny rat
Genus Clyomys
- Clyomys bishopi? - Bishop's fossorial spiny rat
- Clyomys laticeps - Broad-headed spiny rat
Genus Euryzygomatomys
- Euryzygomatomys guiara - Brandt's guiara
- Euryzygomatomys spinosus - Fischer's guiara
Genus Lonchothrix
- Lonchothrix emiliae - tuft-tailed spiny tree rat

Genus Mesomys
- Mesomys hispidus - spiny tree rat
- Mesomys leniceps - woolly-headed spiny tree rat
- Mesomys occultus - Tufted-tailed spiny tree-rat
- Mesomys stimulax - Surinam spiny tree rat
Genus Proechimys
- Proechimys canicollis group
  - Proechimys canicollis - Colombian spiny rat
- Proechimys decumanus group
  - Proechimys decumanus - Pacific spiny rat
- Proechimys echinothrix group
  - Proechimys echinothrix - Stiff-spine spiny rat
- Proechimys gardneri group
  - Proechimys gardneri - Gardner's spiny rat
  - Proechimys kulinae - Kulina spiny rat
  - Proechimys pattoni - Patton's spiny rat
- Proechimys goeldii group
  - Proechimys goeldii - Goeldi's spiny rat
  - Proechimys quadruplicatus - Napo spiny rat
  - Proechimys steerei - Steere's spiny rat
- Proechimys guyannensis group
  - Proechimys guyannensis - Guyenne spiny rat
  - Proechimys roberti - Roberto's spiny rat
- Proechimys longicaudatus group
  - Proechimys brevicauda - Huallaga spiny rat
  - Proechimys cuvieri - Cuvier's spiny rat
  - Proechimys longicaudatus - long-tailed spiny rat
- Proechimys semispinosus group
  - Proechimys oconnelli - O'Connell's spiny rat
  - Proechimys semispinosus - Tome's spiny rat
- Proechimys simonsi group
  - Proechimys simonsi - Simon's spiny rat
- Proechimys trinitatus group
  - Proechimys trinitatus - Trinidad spiny rat
  - Proechimys chrysaeolus - Boyaca spiny rat
  - Proechimys guairae - Guaira spiny rat
  - Proechimys hoplomyoides - Guyanan spiny rat
  - Proechimys magdalenae - Magdelena spiny rat
  - Proechimys mincae - minca spiny rat
  - Proechimys poliopus - gray-footed spiny rat
  - Proechimys urichi - Sucre spiny rat
- Proechimys (Others)
  - Proechimys amphichoricus? - white-spined spiny rat
  - Proechimys cayennensis? - Cayenne spiny rat
  - Proechimys oris? - Para spiny rat
Genus Thrichomys
- Thrichomys apereoides - Common punaré
- Thrichomys fosteri - Foster's punaré
- Thrichomys inermis - Highlands punaré
- Thrichomys laurentius - Sao Lourenço punaré
- Thrichomys pachyurus - Paraguayan punaré
Genus Trinomys
- Trinomys albispinus - White-spined Atlantic spiny rat
- Trinomys dimidiatus - Atlantic spiny rat
- Trinomys eliasi - Elias's Atlantic spiny rat
- Trinomys gratiosus - Gracile Atlantic spiny rat
- Trinomys iheringi - Ihering's Atlantic spiny rat
- Trinomys mirapitanga - Dark-caped Atlantic spiny rat
- Trinomys moojeni - Moojen's Atlantic spiny rat
- Trinomys myosuros - Mouse-tailed Atlantic spiny rat
- Trinomys paratus - Spiked Atlantic spiny rat
- Trinomys setosus - Hairy Atlantic spiny rat
- Trinomys yonenagae - Yonenaga's Atlantic spiny rat

Subfamily Heteropsomyinae

Genus Puertoricomys
- Puertoricomys corozalus - Corozal rat
Genus Heteropsomys
- Heteropsomys antillensis - Antillean cave rat
- Heteropsomys insulans - insular cave rat
Genus Brotomys
- Brotomys voratus - Hispaniolan edible rat (extinct)
Genus Boromys
- Boromys offella - Oriente cave rat (extinct)
- Boromys torrei - Torre's cave rat (extinct)

Subfamily Capromyinae (hutias)

Tribe Capromyini

Genus Capromys
- Capromys garridoi - Garrido's hutia
- Capromys pilorides - Desmarest's hutia
  - C. p. gundlachianus - Archipélago de Sabana hutia
Genus Mesocapromys
- Mesocapromys angelcabrerai - Cabrera's hutia
- Mesocapromys auritus - eared hutia
- Mesocapromys melanurus - black-tailed hutia
- Mesocapromys nanus - dwarf hutia (possibly extinct)
- Mesocapromys sanfelipensis - San Felipe hutia (possibly extinct)
Genus Mysateles
- Mysateles prehensilis - prehensile-tailed hutia
  - M. p. gundlachi - Gundlach's hutia
  - M. p. meridionalis - Isla De La Juventud tree hutia
Genus Geocapromys
- Geocapromys brownii - Jamaican hutia
- Geocapromys caymanensis - Cayman hutia (extinct)
- Geocapromys columbianus - Cuban hutia (extinct)
- Geocapromys ingrahami - Bahamian hutia
- Geocapromys megas (extinct)
- Geocapromys pleistocenicus (extinct)
- Geocapromys thoracatus - Swan Island hutia (extinct)

Tribe Plagiodontini

Genus Hyperplagiodontia
- Hyperplagiodontia araeum - wide-toothed hutia (extinct)
Genus Plagiodontia
- Plagiodontia aedium - Hispaniolan hutia
- Plagiodontia ipnaeum - Samana hutia (extinct)
- Plagiodonta spelaeum - Small Haitian hutia (extinct)
Genus Rhizoplagiodontia
- Rhizoplagiodontia lemkei - Lemke's hutia (extinct)

Tribe Isolobodontini

Genus Isolobodon
- Isolobodon montanus - montane hutia (extinct)
- Isolobodon portoricensis - Puerto Rican hutia (extinct)

Tribe Hexolobodontini

Genus Hexolobodon
- Hexolobodon phenax - imposter hutia (extinct)

Family Heptaxodontidae

Subfamily Clidomyinae

Genus Clidomys
- Clidomys osborni - Osborn's key mouse (extinct)

Subfamily Heptaxodontinae

Genus Elasmodontomys
- Elasmodontomys obliquus - plate-toothed mouse (extinct)
Genus Quemisia
- Quemisia gravis - Hispaniolan giant hutia (extinct)
Genus Amblyrhiza
- Amblyrhiza inundata - blunt-toothed mouse (extinct)

Family Myocastoridae

Genus Myocastor
- Myocastor coypus - coypu or nutria

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Suborder Anomaluromorpha

Family Anomaluridae

Subfamily Anomalurinae

Genus Anomalurus
- Anomalurus beecrofti - Beecroft's flying squirrel
- Anomalurus derbianus - Lord Derby's scaly-tailed squirrel
- Anomalurus peli - Pel's scaly-tailed squirrel
- Anomalurus pusillus - dwarf scaly-tailed squirrel

Subfamily Zenkerellinae

Genus Idiurus
- Idiurus zenkeri - pygmy scaly-tailed squirrel
- Idiurus macrotis - long-eared scaly-tailed squirrel
Genus Zenkerella
- Zenkerella insignis - Cameroon scaly-tailed squirrel

Family Pedetidae

Genus Pedetes
- Pedetes capensis - South African springhare
- Pedetes surdaster - East African springhare

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Suborder Sciuromorpha

Family Aplodontidae

Genus Aplodontia
- Aplodontia rufa - mountain beaver

Family Sciuridae

Subfamily Ratufinae

Genus Ratufa
- Ratufa affinis - pale giant squirrel
- Ratufa bicolor - black giant squirrel
- Ratufa indica - Indian giant squirrel
- Ratufa macroura - grizzled giant squirrel

Subfamily Sciurillinae

Genus Sciurillus
- Sciurillus pusillus - Neotropical pygmy squirrel

Subfamily Sciurinae

Tribe Sciurini

Genus Microsciurus
- Microsciurus alfari - Central American dwarf squirrel
- Microsciurus flaviventer - Amazon dwarf squirrel or Guianan squirrel
- Microsciurus mimulus - western dwarf squirrel
- Microsciurus santanderensis - Santander dwarf squirrel
Genus Rheithrosciurus
- Rheithrosciurus macrotis - tufted ground squirrel
Genus Sciurus
- Subgenus Guerlinguetus
  - Sciurus aestuans - Brazilian squirrel or Guianan squirrel
  - Sciurus argentinius - South Yungas red squirrel
  - Sciurus gilvigularis - yellow-throated squirrel
  - Sciurus granatensis - red-tailed squirrel
  - Sciurus ignitus - Bolivian squirrel
  - Sciurus ingrami - Ingram's squirrel
  - Sciurus pucheranii - Andean squirrel
  - Sciurus richmondi - Richmond's squirrel
  - Sciurus sanborni - Sanborn's squirrel
  - Sciurus stramineus - Guayaquil squirrel
- Subgenus Hadrosciurus
  - Sciurus flammifer - fiery squirrel
  - Sciurus pyrrhinus - Junín red squirrel
- Subgenus Hesperosciurus
  - Sciurus griseus - western gray squirrel
- Subgenus Otosciurus
  - Sciurus aberti - Abert's squirrel
- Subgenus Sciurus
  - Sciurus alleni - Allen's squirrel
  - Sciurus arizonensis - Arizona gray squirrel
  - Sciurus aureogaster - Mexican gray squirrel
  - Sciurus carolinensis - eastern gray squirrel
  - Sciurus colliaei - Collie's squirrel
  - Sciurus deppei - Deppe's squirrel
  - Sciurus lis - Japanese squirrel
  - Sciurus meridionalis - Calabrian black squirrel
  - Sciurus nayaritensis - Mexican fox squirrel
  - Sciurus niger - eastern fox squirrel
  - Sciurus oculatus - Peters's squirrel
  - Sciurus variegatoides - variegated squirrel
  - Sciurus vulgaris - Eurasian red squirrel
  - Sciurus yucatanensis - Yucatán squirrel
- Subgenus Tenes
  - Sciurus anomalus - Persian squirrel
- Subgenus Urosciurus
  - Sciurus igniventris - northern Amazon red squirrel
  - Sciurus spadiceus - southern Amazon red squirrel
Genus Syntheosciurus
- Syntheosciurus brochus - Bangs's mountain squirrel
Genus Tamiasciurus
- Tamiasciurus douglasii - Douglas's squirrel
  - Tamiasciurus douglasii mearnsi - Mearns's squirrel
- Tamiasciurus fremonti - Southwestern red squirrel
  - Tamiasciurus fremonti grahamensis - Mount Graham red squirrel
- Tamiasciurus hudsonicus - American red squirrel

Tribe Pteromyini

Genus Aeretes
- Aeretes melanopterus - North Chinese flying squirrel
Genus Aeromys
- Aeromys tephromelas - black flying squirrel
- Aeromys thomasi - Thomas' flying squirrel
Genus Belomys
- Belomys pearsonii - hairy-footed flying squirrel
Genus Biswamoyopterus
- Biswamoyopterus biswasi - Namdapha flying squirrel
- Biswamoyopterus gaoligongensis - Mount Gaoligong flying squirrel
- Biswamoyopterus laoensis - Laotian giant flying squirrel
Genus Eoglaucomys
- Eoglaucomys fimbriatus - Kashmir flying squirrel
  - Eoglaucomys fimbriatus baberi - Afghan flying squirrel
Genus Eupetaurus
- Eupetaurus cinereus - Western woolly flying squirrel
- Eupetaurus nivamons - Yunnan woolly flying squirrel
- Eupetaurus tibetensis - Tibetan woolly flying squirrel
Genus Glaucomys
- Glaucomys oregonensis - Humboldt's flying squirrel
- Glaucomys sabrinus - northern flying squirrel
- Glaucomys volans - southern flying squirrel
Genus Hylopetes
Genus Iomys
- Iomys horsfieldii - Javanese flying squirrel
- Iomys sipora - Mentawi flying squirrel
Genus Petaurillus
Genus Petaurista
Genus Petinomys
- Petinomys crinitus - Mindanao flying squirrel
- Petinomys fuscocapillus - Travancore flying squirrel
- Petinomys genibarbis - whiskered flying squirrel
- Petinomys hageni - Hagen's flying squirrel
- Petinomys lugens - Siberut flying squirrel
- Petinomys mindanensis - Mindanao flying squirrel
- Petinomys sagitta - arrow flying squirrel
- Petinomys setosus - Temminck's flying squirrel
- Petinomys vordermanni - Vordermann's flying squirrel
Genus Pteromys
- Pteromys momonga - Japanese flying squirrel
- Pteromys volans - Siberian flying squirrel
Genus Pteromyscus
- Pteromyscus pulverulentus - smoky flying squirrel
Genus Trogopterus
- Trogopterus xanthipes - complex-toothed flying squirrel

Subfamily Callosciurinae

Genus Callosciurus
- Callosciurus adamsi - ear-spot squirrel
- Callosciurus albescens - Kloss's squirrel
- Callosciurus baluensis - Kinabalu squirrel
- Callosciurus caniceps - gray-bellied squirrel
- Callosciurus erythraeus - Pallas's squirrel
- Callosciurus finlaysonii - Finlayson's squirrel
- Callosciurus flavimanus?
- Callosciurus honkhoaiensis - Hon Khoai squirrel
- Callosciurus inornatus - inornate squirrel
- Callosciurus melanogaster - Mentawai squirrel
- Callosciurus nigrovittatus - black-striped squirrel
- Callosciurus notatus - plantain squirrel
- Callosciurus orestes - Borneo black-banded squirrel
- Callosciurus phayrei - Phayre's squirrel
- Callosciurus prevostii - Prevost's squirrel
- Callosciurus pygerythrus - Irrawaddy squirrel
- Callosciurus quinquestriatus - Anderson's squirrel
Genus Dremomys
- Dremomys everetti - Bornean mountain ground squirrel
- Dremomys gularis - red-throated squirrel
- Dremomys lokriah - orange-bellied Himalayan squirrel
- Dremomys pernyi - Perny's long-nosed squirrel
- Dremomys pyrrhomerus - red-hipped squirrel
- Dremomys rufigenis - Asian red-cheeked squirrel
Genus Exilisciurus
- Exilisciurus concinnus - Philippine pygmy squirrel
- Exilisciurus exilis - least pygmy squirrel
- Exilisciurus whiteheadi - tufted pygmy squirrel
Genus Funambulus
- Subgenus Funambulus
  - Funambulus layardi - Layard's palm squirrel
  - Funambulus obscurus - Dusky palm squirrel
  - Funambulus palmarum - Indian palm squirrel
  - Funambulus sublineatus - dusky palm squirrel
  - Funambulus tristriatus - jungle palm squirrel
- Subgenus Prasadsciurus
  - Funambulus pennantii - northern palm squirrel
Genus Glyphotes
- Glyphotes simus - sculptor squirrel
Genus Hyosciurus
- Hyosciurus heinrichi - montane long-nosed squirrel
- Hyosciurus ileile - lowland long-nosed squirrel
Genus Lariscus
- Lariscus hosei - four-striped ground squirrel
- Lariscus insignis - three-striped ground squirrel
- Lariscus niobe - Niobe ground squirrel
- Lariscus obscurus - Mentawai three-striped squirrel
Genus Menetes
- Menetes berdmorei - Berdmore's ground squirrel
Genus Nannosciurus
- Nannosciurus melanotis - black-eared squirrel
Genus Prosciurillus
- Prosciurillus abstrusus - secretive dwarf squirrel
- Prosciurillus alstoni - Alston's Sulawesi dwarf squirrel
- Prosciurillus leucomus - whitish dwarf squirrel
- Prosciurillus murinus - Celebes dwarf squirrel
- Prosciurillus rosenbergii - Sanghir squirrel
- Prosciurillus topapuensis - Roux's Sulawesi dwarf squirrel
- Prosciurillus weberi - Weber's dwarf squirrel
Genus Rhinosciurus
- Rhinosciurus laticaudatus - shrew-faced squirrel
Genus Rubrisciurus
- Rubrisciurus rubriventer - red-bellied squirrel
Genus Sundasciurus
- Sundasciurus altitudinis - Sumatran mountain squirrel
- Sundasciurus brookei - Brooke's squirrel
- Sundasciurus davensis - Davao squirrel
- Sundasciurus everetti - Bornean mountain ground squirrel
- Sundasciurus fraterculus - fraternal squirrel
- Sundasciurus hippurus - horse-tailed squirrel
- Sundasciurus hoogstraali - Busuanga squirrel
- Sundasciurus jentinki - Jentink's squirrel
- Sundasciurus juvencus - northern Palawan tree squirrel
- Sundasciurus lowii - Low's squirrel
- Sundasciurus mindanensis - Mindanao squirrel
- Sundasciurus moellendorffi - Culion tree squirrel
- Sundasciurus natunensis - Natuna squirrel
- Sundasciurus philippinensis - Philippine tree squirrel
- Sundasciurus rabori - Palawan montane squirrel
- Sundasciurus robinsoni - Robinson's squirrel
- Sundasciurus samarensis - Samar squirrel
- Sundasciurus steerii - southern Palawan tree squirrel
- Sundasciurus tahan - Upland squirrel
- Sundasciurus tenuis - slender squirrel
Genus Tamiops
- Tamiops mcclellandii - Himalayan striped squirrel
- Tamiops maritimus - maritime striped squirrel
- Tamiops rodolphii - Cambodian striped squirrel
- Tamiops swinhoei - Swinhoe's striped squirrel

Subfamily Xerinae

Tribe Xerini

Genus Atlantoxerus
- Atlantoxerus getulus - Barbary ground squirrel
Genus Spermophilopsis
- Spermophilopsis leptodactylus - long-clawed ground squirrel
Genus Euxerus
- Euxerus erythropus - striped ground squirrel
Genus Geosciurus
- Geosciurus inauris - Cape ground squirrel or South African ground squirrel
- Geosciurus princeps - Damara ground squirrel
Genus Xerus
- Xerus rutilus - unstriped ground squirrel

Tribe Protoxerini

Genus Epixerus
- Epixerus ebii - Ebian's palm squirrel, Temminck's giant squirrel, western palm squirrel
  - Epixerus ebii wilsoni - Biafran palm squirrel
Genus Funisciurus
- Funisciurus anerythrus - Thomas's rope squirrel
- Funisciurus bayonii - Lunda rope squirrel
- Funisciurus carruthersi - Carruther's mountain squirrel
- Funisciurus congicus - Congo rope squirrel
- Funisciurus isabella - Lady Burton's rope squirrel
- Funisciurus lemniscatus - ribboned rope squirrel
- Funisciurus leucogenys - red-cheeked rope squirrel
- Funisciurus pyrropus - fire-footed rope squirrel
- Funisciurus substriatus - Kintampo rope squirrel
Genus Heliosciurus
- Heliosciurus gambianus - Gambian sun squirrel
- Heliosciurus mutabilis - mutable sun squirrel
- Heliosciurus punctatus - Small sun squirrel
- Heliosciurus rufobrachium - red-legged sun squirrel
- Heliosciurus ruwenzorii - Ruwenzori sun squirrel
- Heliosciurus undulatus - Zanj sun squirrel
Genus Myosciurus
- Myosciurus pumilio - African pygmy squirrel
Genus Paraxerus
- Paraxerus alexandri - Alexander's bush squirrel
- Paraxerus boehmi - Boehm's bush squirrel
- Paraxerus cepapi - Smith's bush squirrel
- Paraxerus cooperi - Cooper's green squirrel
- Paraxerus flavovittis - striped bush squirrel
- Paraxerus lucifer - African red bush squirrel
- Paraxerus ochraceus - Huet's bush squirrel
- Paraxerus palliatus - red bush squirrel
- Paraxerus poensis - Fernando Po squirrel
- Paraxerus vexillarius - Swynnerton's bush squirrel
- Paraxerus vincenti - Vincent's bush squirrel
Genus Protoxerus
- Protoxerus aubinnii - slender-tailed squirrel
- Protoxerus stangeri - forest giant squirrel or Stanger's squirrel

Tribe Marmotini

Genus Ammospermophilus
- Ammospermophilus harrisii - Harris's antelope squirrel
- Ammospermophilus insularis - Espirito Santo Island squirrel
- Ammospermophilus interpres - Texas antelope squirrel
- Ammospermophilus leucurus - white-tailed antelope squirrel
- Ammospermophilus nelsoni - Nelson's antelope squirrel
Genus Callospermophilus
Genus Cynomys
- Cynomys gunnisoni - Gunnison's prairie dog
- Cynomys leucurus - white-tailed prairie dog
- Cynomys ludovicianus - black-tailed prairie dog
- Cynomys mexicanus - Mexican prairie dog
- Cynomys parvidens - Utah prairie dog
Genus Eutamias
- Eutamias sibiricus - Siberian chipmunk
Genus Ictidomys
Genus Marmota
- Subgenus Marmota
  - Marmota baibacina - gray marmot
  - Marmota bobak - Bobak marmot
  - Marmota broweri - Alaska marmot
  - Marmota camtschatica - black-capped marmot
  - Marmota caudata - long-tailed marmot
  - Marmota himalayana - Himalayan marmot
  - Marmota marmota - alpine marmot
  - Marmota marmota latirostris - tatra marmot
  - Marmota menzbieri - Menzbier's marmot
  - Marmota monax - woodchuck
  - Marmota sibirica - Tarbagan marmot
- Subgenus Petromarmota
  - Marmota caligata - hoary marmot
  - Marmota flaviventris - yellow-bellied marmot
  - Marmota olympus - Olympic marmot
  - Marmota vancouverensis - Vancouver marmot
Genus Neotamias
- Neotamias alpinus - alpine chipmunk
- Neotamias amoenus - yellow-pine chipmunk
- Neotamias bulleri - Buller's chipmunk
- Neotamias canipes - gray-footed chipmunk
- Neotamias cinereicollis - gray-collared chipmunk
- Neotamias dorsalis - cliff chipmunk
- Neotamias durangae - Durango chipmunk
- Neotamias merriami - Merriam's chipmunk
- Neotamias minimus - least chipmunk
- Neotamias obscurus - California chipmunk
- Neotamias ochrogenys - yellow-cheeked chipmunk
- Neotamias palmeri - Palmer's chipmunk
- Neotamias panamintinus - Panamint chipmunk
- Neotamias quadrimaculatus - long-eared chipmunk
- Neotamias quadrivittatus - Colorado chipmunk
- Neotamias ruficaudus - red-tailed chipmunk
- Neotamias rufus - Hopi chipmunk
- Neotamias senex - Allen's chipmunk
- Neotamias siskiyou - Siskiyou chipmunk
- Neotamias sonomae - Sonoma chipmunk
- Neotamias speciosus - lodgepole chipmunk
- Neotamias townsendii - Townsend's chipmunk
- Neotamias umbrinus - Uinta chipmunk
Genus Notocitellus
- Notocitellus adocetus - tropical ground squirrel
- Notocitellus annulatus - ring-tailed ground squirrel
Genus Otospermophilus
Genus Poliocitellus
- Poliocitellus franklinii - Franklin's ground squirrel
Genus Sciurotamias
- Sciurotamias davidianus - Père David's rock squirrel
- Sciurotamias forresti - Forrest's rock squirrel
Genus Spermophilus
Genus Tamias
- Tamias striatus - eastern chipmunk
Genus Urocitellus
Genus Xerospermophilus

Family Gliridae

Subfamily Graphiurinae

Genus Graphiurus
- Graphiurus angolensis - Angolan African dormouse
- Graphiurus christyi - Christy's dormouse
- Graphiurus crassicaudatus - Jentink's dormouse
- Graphiurus johnstoni - Johnston's African dormouse
- Graphiurus kelleni - Kellen's dormouse
- Graphiurus lorraineus - Lorrain dormouse
- Graphiurus microtis - small-eared dormouse
- Graphiurus monardi - Monard's dormouse
- Graphiurus murinus - woodland dormouse
- Graphiurus nagtglasii - Nagtglas's African dormouse
- Graphiurus ocularis - spectacled dormouse
- Graphiurus platyops - rock dormouse
- Graphiurus rupicola - stone dormouse
- Graphiurus surdus - silent dormouse
- Graphiurus walterverheyeni - Walter Verheyen's African dormouse

Subfamily Leithiinae

Genus Chaetocauda
- Chaetocauda sichuanensis - Chinese dormouse
Genus Dryomys
- Dryomys laniger - woolly dormouse
- Dryomys niethammeri - Niethammer's forest dormouse
- Dryomys nitedula - forest dormouse
Genus Eliomys
- Eliomys melanurus - Asian garden dormouse
- Eliomys munbyanus - Maghreb garden dormouse
- Eliomys quercinus - garden dormouse
Genus Muscardinus
- Muscardinus avellanarius - hazel dormouse
Genus Myomimus
- Myomimus personatus - masked mouse-tailed dormouse
- Myomimus roachi - Roach's mouse-tailed dormouse
- Myomimus setzeri - Setzer's mouse-tailed dormouse
Genus Selevinia
- Selevinia betpakdalaensis - desert dormouse

Subfamily Glirinae

Genus Glirulus
- Glirulus japonicus - Japanese dormouse
Genus Glis
- Glis glis - edible dormouse
- Glis persicus - Iranian edible dormouse

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Suborder Castorimorpha

Family Castoridae

Genus Castor
- Castor canadensis - Canadian beaver
- Castor fiber - Eurasian beaver

Family Geomyidae

Genus Cratogeomys
- Cratogeomys castanops - Yellow-faced pocket gopher
- Cratogeomys fulvescens - Oriental Basin pocket gopher
- Cratogeomys fumosus - Smoky pocket gopher
- Cratogeomys goldmani - Goldman's pocket gopher
- Cratogeomys merriami - Merriam's pocket gopher
- Cratogeomys perotensis - Perote pocket gopher
- Cratogeomys planiceps - Flat-headed pocket gopher
Genus Geomys
- Geomys arenarius - desert pocket gopher
- Geomys attwateri - Attwater's pocket gopher
- Geomys breviceps - Baird's pocket gopher
- Geomys bursarius - plains pocket gopher
- Geomys jugossicularis - Hall's pocket gopher
- Geomys knoxjonesi - Knox Jones's pocket gopher
- Geomys lutescens - Sand Hills pocket gopher
- Geomys personatus - Texas pocket gopher
- Geomys pinetis - southeastern pocket gopher
- Geomys streckeri - Strecker's pocket gopher
- Geomys texensis - Llano pocket gopher
- Geomys tropicalis - tropical pocket gopher
Genus Heterogeomys
- Heterogeomys cavator - Chiriqui pocket gopher
- Heterogeomys cherriei - Cherrie's pocket gopher
- Heterogeomys dariensis - Darien pocket gopher
- Heterogeomys heterodus - variable pocket gopher
- Heterogeomys hispidus - hispid pocket gopher
- Heterogeomys lanius - big pocket gopher
- Heterogeomys underwoodi - Underwood's pocket gopher
Genus Orthogeomys
- Orthogeomys cuniculus? - Oaxacan pocket gopher
- Orthogeomys grandis - giant pocket gopher
- Orthogeomys matagalpae? - Nicaraguan pocket gopher
- Orthogeomys thaeleri? - Thaeler's pocket gopher
Genus Pappogeomys
- Pappogeomys bulleri - Buller's pocket gopher
  - Pappogeomys bulleri alcorni - Alcorn's pocket gopher
Genus Thomomys
- Subgenus Megascapheus
  - Thomomys atrovarius - Black-and-Brown pocket gopher
  - Thomomys bottae - Botta's pocket gopher
  - Thomomys bulbivorus - Camas pocket gopher
  - Thomomys nayarensis - Nayar pocket gopher
  - Thomomys sheldoni - Sierra Madre Occidental pocket gopher
  - Thomomys townsendii - Townsend's pocket gopher
  - Thomomys umbrinus - southern pocket gopher
- Subgenus Thomomys
  - Thomomys clusius - Wyoming pocket gopher
  - Thomomys idahoensis - Idaho pocket gopher
  - Thomomys mazama - western pocket gopher
    - Thomomys mazama tacomensis - Tacoma pocket gopher
  - Thomomys monticola - mountain pocket gopher
  - Thomomys talpoides - northern pocket gopher
Genus Zygogeomys
- Zygogeomys trichopus - Michoacan pocket gopher

Family Heteromyidae

Subfamily Dipodomyinae

Genus Dipodomys
- Dipodomys agilis - agile kangaroo rat
- Dipodomys californicus - California kangaroo rat
- Dipodomys compactus - Gulf Coast kangaroo rat
- Dipodomys deserti - desert kangaroo rat
- Dipodomys elator - Texas kangaroo rat
- Dipodomys elephantinus - big-eared kangaroo rat
- Dipodomys gravipes - San Quintin kangaroo rat
- Dipodomys heermanni - Heerman's kangaroo rat
- Dipodomys ingens - giant kangaroo rat
- Dipodomys insularis - San Jose Island kangaroo rat
  - Dipodomys merriami margaritae - Margarita Island kangaroo rat
- Dipodomys merriami - Merriam's kangaroo rat
- Dipodomys microps - chisel-toothed kangaroo rat
- Dipodomys nelsoni - Nelson's kangaroo rat
- Dipodomys nitratoides - Fresno kangaroo rat
- Dipodomys ordii - Ord's kangaroo rat
- Dipodomys panamintinus - Panamint kangaroo rat
- Dipodomys phillipsii - Phillip's kangaroo rat
- Dipodomys simulans - Dulzura kangaroo rat
- Dipodomys spectabilis - bannertail kangaroo rat
- Dipodomys stephensi - Stephen's kangaroo rat
- Dipodomys venustus - narrow-faced kangaroo rat
Genus Microdipodops
- Microdipodops megacephalus - dark kangaroo mouse
- Microdipodops pallidus - pale kangaroo mouse

Subfamily Heteromyinae

Genus Heteromys
- Heteromys adspersus - Panamanian spiny pocket mouse
- Heteromys anomalus - Trinidad spiny pocket mouse
- Heteromys australis - southern spiny pocket mouse
- Heteromys catopterius - Overlook spiny pocket mouse
- Heteromys desmarestianus - Desmarest's spiny pocket mouse
- Heteromys gaumeri - Gaumer's spiny pocket mouse
- Heteromys goldmani - Goldman's spiny pocket mouse
- Heteromys irroratus - Mexican spiny pocket mouse
- Heteromys nelsoni - Nelson's spiny pocket mouse
- Heteromys nubicolens - Cloud-dwelling spiny pocket mouse
- Heteromys oasicus - Paraguaná spiny pocket mouse
- Heteromys oresterus - mountain spiny pocket mouse
- Heteromys pictus - painted spiny pocket mouse
- Heteromys salvini - Salvin's spiny pocket mouse
- Heteromys spectabilis - Jaliscan spiny pocket mouse
- Heteromys teleus - Ecuadoran spiny pocket mouse

Subfamily Perognathinae

Genus Chaetodipus
- Chaetodipus arenarius - little desert pocket mouse
- Chaetodipus artus - narrow-skulled pocket mouse
- Chaetodipus baileyi - Bailey's pocket mouse
- Chaetodipus californicus - California pocket mouse
- Chaetodipus dalquesti - Dalquest's pocket mouse
- Chaetodipus eremicus - Chihuahuan pocket mouse
- Chaetodipus fallax - San Diego pocket mouse
- Chaetodipus formosus - long-tailed pocket mouse
- Chaetodipus goldmani - Goldman's pocket mouse
- Chaetodipus hispidus - hispid pocket mouse
- Chaetodipus intermedius - rock pocket mouse
- Chaetodipus lineatus - lined pocket mouse
- Chaetodipus nelsoni - Nelson's pocket mouse
- Chaetodipus penicillatus - desert pocket mouse
- Chaetodipus pernix - Sinaloan pocket mouse
- Chaetodipus rudinoris - Baja California pocket mouse
- Chaetodipus spinatus - spiny pocket mouse
Genus Perognathus
- Perognathus alticola - white-eared pocket mouse
- Perognathus amplus - Arizona pocket mouse
- Perognathus fasciatus - olive-backed pocket mouse
- Perognathus flavescens - plains pocket mouse
- Perognathus flavus - silky pocket mouse
- Perognathus inornatus - San Joaquin pocket mouse
- Perognathus longimembris - little pocket mouse
  - Perognathus longimembris pacificus - Pacific pocket mouse
- Perognathus merriami - Merriam's pocket mouse
- Perognathus parvus - Great Basin pocket mouse

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Suborder Myomorpha

Family Dipodidae

Subfamily Allactaginae

Genus Allactaga
- Subgenus Allactaga
  - Allactaga firouzi - Iranian jerboa
  - Allactaga hotsoni - Hotson's jerboa
  - Allactaga major - great jerboa
  - Allactaga severtzovi - Severtzov's jerboa
- Subgenus Orientallactaga
  - Allactaga balikunica - Balikun jerboa
  - Allactaga bullata - Gobi jerboa
  - Allactaga sibirica - Mongolian five-toed jerboa
Genus Allactodipus
- Allactodipus bobrinskii - Bobrinski's jerboa
Genus Pygeretmus
- Pygeretmus platyurus - lesser fat-tailed jerboa
- Pygeretmus pumilio - dwarf fat-tailed jerboa
- Pygeretmus shitkovi - greater fat-tailed jerboa
Genus Scarturus
- Scarturus elater - small five-toed jerboa
- Scarturus euphratica - Euphrates jerboa
- Scarturus tetradactyla - four-toed jerboa
- Scarturus vinogradovi - Vinogradov's jerboa
- Scarturus williamsi - Williams's jerboa

Subfamily Cardiocraniinae

Genus Cardiocranius
- Cardiocranius paradoxus - five-toed pygmy jerboa
Genus Salpingotulus
- Salpingotulus michaelis - Baluchistan pygmy jerboa
Genus Salpingotus
- Subgenus Anguistodontus
  - Salpingotus crassicauda - thick-tailed pygmy jerboa
- Subgenus Prosalpingotus
  - Salpingotus heptneri - Heptner's pygmy jerboa
  - Salpingotus pallidus - pallid pygmy jerboa
  - Salpingotus thomasi - Thomas' pygmy jerboa
- Subgenus Salpingotus
  - Salpingotus kozlovi - Koslov's pygmy jerboa

Subfamily Dipodinae

Genus Dipus
- Dipus sagitta - northern three-toed jerboa
Genus Eremodipus
- Eremodipus lichtensteini - Lichtenstein's jerboa
Genus Jaculus
- Jaculus blanfordi - Blanford's jerboa
- Jaculus hirtipes - African hammada jerboa
- Jaculus jaculus - lesser Egyptian jerboa
- Jaculus orientalis - greater Egyptian jerboa
- Jaculus thaleri - Thaler's jerboa
- Jaculus turcmenicus? - Turkmen jerboa
Genus Paradipus
- Paradipus ctenodactylus - comb-toed jerboa
Genus Stylodipus
- Stylodipus andrewsi - Andrew's three-toed jerboa
- Stylodipus sungorus - Mongolian three-toed jerboa
- Stylodipus telum - thick-tailed three-toed jerboa

Subfamily Euchoreutinae

Genus Euchoreutes
- Euchoreutes naso - long-eared jerboa

Subfamily Sicistinae

Genus Sicista
- Sicista armenica - Armenian birch mouse
- Sicista betulina - northern birch mouse
- Sicista caucasica - Caucasian birch mouse
- Sicista caudata - long-tailed birch mouse
- Sicista cimlanica - Tsimlyansk birch mouse
- Sicista concolor - Chinese birch mouse
- Sicista kazbegica - Kazbeg birch mouse
- Sicista kluchorica - Kluchor birch mouse
- Sicista loriger - Nordmann's birch mouse
- Sicista napaea - Altai birch mouse
- Sicista pseudonapaea - gray birch mouse
- Sicista severtzovi - Severtzov's birch mouse
- Sicista strandi - Strand's birch mouse
- Sicista subtilis - southern birch mouse
- Sicista talgarica - Talgar birch mouse
- Sicista terskeica - Terskey birch mouse
- Sicista tianshanica - Tien Shan birch mouse
- Sicista trizona - Hungarian birch mouse
- Sicista zhetysuica - Zhetysu birch mouse

Subfamily Zapodinae

Genus Eozapus
- Eozapus setchuanus - Chinese jumping mouse
Genus Napaeozapus
- Napaeozapus insignis - woodland jumping mouse
Genus Zapus
- Zapus hudsonius - Northern meadow jumping mouse
  - Zapus hudsonius preblei - Preble's meadow jumping mouse
- Zapus luteus - Southern meadow jumping mouse
- Zapus montanus - Central Pacific jumping mouse
- Zapus oregonus - Oregon jumping mouse
- Zapus pacificus - South Pacific jumping mouse
- Zapus princeps - Southwestern jumping mouse
- Zapus saltator - Northwestern jumping mouse
- Zapus trinotatus - North Pacific jumping mouse

Family Platacanthomyidae

Genus Platacanthomys
- Platacanthomys lasiurus - Malabar spiny dormouse
Genus Typhlomys
- Typhlomys cinereus - Chapa pygmy dormouse

Family Spalacidae

Subfamily Myospalacinae

Genus Eospalax
- Eospalax fontanierii - Chinese zokor
- Eospalax rothschildi - Rothschild's zokor
- Eospalax smithii - Smith's zokor
Genus Myospalax
- Myospalax aspalax - false zokor
- Myospalax epsilanus? - Manchurian zokor
- Myospalax myospalax - Siberian zokor
- Myospalax psilurus - Transbaikal zokor

Subfamily Rhizomyinae

Genus Cannomys
- Cannomys badius - lesser bamboo rat
Genus Rhizomys
- Rhizomys pruinosus - hoary bamboo rat
- Rhizomys sinensis - Chinese bamboo rat
- Rhizomys sumatrensis - large bamboo rat

Subfamily Tachyoryctinae

Genus Tachyoryctes
- Tachyoryctes ankoliae - Ankole mole rat
- Tachyoryctes annectens - Mianzini mole rat
- Tachyoryctes audax - audacious mole rat
- Tachyoryctes daemon - demon mole rat
- Tachyoryctes ibeanus - Kenyan African mole rat
- Tachyoryctes macrocephalus - big-headed mole rat
- Tachyoryctes naivashae - Naivasha mole rat
- Tachyoryctes rex - king mole rat
- Tachyoryctes ruandae - Ruanda mole rat
- Tachyoryctes ruddi - Rudd's mole rat
- Tachyoryctes spalacinus - Embi mole rat
- Tachyoryctes splendens - East African mole rat
- Tachyoryctes storeyi - Storey's African mole rat

Subfamily Spalacinae

Genus Nannospalax
- Nannospalax carmeli? - Mt. Carmel blind mole rat
- Nannospalax ehrenbergi? - Middle East blind mole rat
- Nannospalax galili? - Upper Galilee Mountains blind mole rat
- Nannospalax golani? - Golan Heights blind mole rat
- Nannospalax leucodon - lesser blind mole rat
- Nannospalax judaei? - Judean Mountains blind mole rat
- Nannospalax nehringi? - Nehring's blind mole rat
- Nannospalax xanthodon - Anatolian blind mole-rat
Genus Spalax
- Spalax antiquus - Mehely's blind mole-rat
- Spalax arenarius - sandy mole rat
- Spalax giganteus - giant mole rat
- Spalax graecus - Bukovin mole rat
- Spalax istricus - Oltenia blind mole-rat
- Spalax microphthalmus - greater mole rat
- Spalax munzuri? - Munzur mole-rat
- Spalax uralensis - Kazakhstan blind mole rat
- Spalax zemni - Podolsk mole rat

Family Calomyscidae

Genus Calomyscus
- Calomyscus bailwardi - Zagros mouse-like hamster
- Calomyscus baluchi - Balochistan mouse-like hamster
- Calomyscus elburzensis - Elburz mouse-like hamster
- Calomyscus grandis - Noble mouse-like hamster
- Calomyscus hotsoni - Makran mouse-like hamster
- Calomyscus mystax - Turkmen mouse-like hamster
- Calomyscus tsolovi - Syrian mouse-like hamster from
- Calomyscus urartensis - Azerbaijani mouse-like hamster

Family Nesomyidae

Subfamily Petromyscinae

Genus Petromyscus
- Petromyscus barbouri - Barbour's rock mouse
- Petromyscus collinus - pygmy rock mouse
- Petromyscus monticularis - Brukkaros pygmy rock mouse
- Petromyscus shortridgei - Shortridge's rock mouse

Subfamily Delanymyinae

Genus Delanymys
- Delanymys brooksi - Delany's swamp mouse

Subfamily Dendromurinae

Genus Dendromus
- Dendromus insignis - remarkable climbing mouse
- Dendromus kahuziensis - Mount Kahuzi climbing mouse
- Dendromus kivu? - Kivu climbing mouse
- Dendromus lachaisei - Lachaise's climbing mouse
- Dendromus leucostomus - Monard's African climbing mouse
- Dendromus lovati - Lovat's climbing mouse
- Dendromus melanotis - gray climbing mouse
- Dendromus mesomelas - Brant's climbing mouse
- Dendromus messorius - banana climbing mouse
- Dendromus mystacalis - chestnut climbing mouse
- Dendromus nyasae - Kivu climbing mouse
- Dendromus nyikae - Nyika climbing mouse
- Dendromus oreas - Cameroon climbing mouse
- Dendromus ruppi - Rupp's African climbing mouse
- Dendromus vernayi - Vernay's climbing mouse
Genus Dendroprionomys
- Dendroprionomys rousseloti - velvet climbing mouse
Genus Malacothrix
- Malacothrix typica - gerbil mouse
Genus Megadendromus
- Megadendromus nikolausi - Nikolaus's mouse
Genus Prionomys
- Prionomys batesi - Dollman's tree mouse
Genus Steatomys
- Steatomys bocagei - Bocage's African fat mouse
- Steatomys caurinus - northwestern fat mouse
- Steatomys cuppedius - dainty fat mouse
- Steatomys jacksoni - Jackson's fat mouse
- Steatomys krebsii - Kreb's fat mouse
- Steatomys opimus - Pousargue's African fat mouse
- Steatomys parvus - tiny fat mouse
- Steatomys pratensis - fat mouse

Subfamily Mystromyinae

Genus Mystromys
- Mystromys albicaudatus - white-tailed rat or white-tailed mouse

Subfamily Cricetomyinae

Genus Beamys
- Beamys hindei - long-tailed pouched rat
- Beamys major - greater long-tailed pouched rat
Genus Cricetomys
- Cricetomys ansorgei - Southern giant pouched rat
- Cricetomys emini - Emin's giant pouched rat
- Cricetomys gambianus - Gambian giant pouched rat
- Cricetomys kivuensis - Kivu giant pouched rat
Genus Saccostomus
- Saccostomus campestris - South African pouched mouse
- Saccostomus mearnsi - Mearns's pouched mouse

Subfamily Nesomyinae

Genus Brachytarsomys
- Brachytarsomys albicauda - white-tailed rat
- Brachytarsomys mahajambaensis - (extinct)
- Brachytarsomys villosa - hairy-tailed antsangy
Genus Brachyuromys
- Brachyuromys betsileoensis - Betsileo short-tailed rat
- Brachyuromys ramirohitra - gregarious short-tailed rat
Genus Eliurus
- Eliurus antsingy - Tsingy tufted-tailed rat
- Eliurus carletoni - Ankarana Special Reserve tufted-tailed rat
- Eliurus danieli - Daniel's tufted-tailed rat
- Eliurus ellermani - Ellerman's tufted-tailed rat
- Eliurus grandidieri - Grandidier's tufted-tailed rat
- Eliurus majori - Major's tufted-tailed rat
- Eliurus minor - lesser tufted-tailed rat
- Eliurus myoxinus - dormouse tufted-tailed rat
- Eliurus penicillatus - white-tipped tufted-tailed rat
- Eliurus petteri - Petter's tufted-tailed rat
- Eliurus tanala - Tanala tufted-tailed rat
- Eliurus webbi - Webb's tufted-tailed rat
Genus Gymnuromys
- Gymnuromys roberti - voalavoanala
Genus Hypogeomys
- Hypogeomys antimena - Malagasy giant rat
- Hypogeomys australis - (extinct)
Genus Macrotarsomys
- Macrotarsomys bastardi - bastard big-footed mouse
- Macrotarsomys ingens - greater big-footed mouse
- Macrotarsomys petteri - Petter's big-footed mouse
Genus Monticolomys
- Monticolomys koopmani - Koopman's montane voalavo
Genus Nesomys
- Nesomys audeberti - white-bellied nesomys
- Nesomys lambertoni - western nesomys
- Nesomys narindaensis - (extinct)
- Nesomys rufus - island mouse
Genus Voalavo
- Voalavo antsahabensis - Eastern voalavo
- Voalavo gymnocaudus - Northern voalavo

Family Cricetidae

Subfamily Lophiomyinae

Genus Lophiomys
- Lophiomys imhausi - maned rat or crested rat

Subfamily Cricetinae

Genus Allocricetulus
- Allocricetulus curtatus - Mongolian hamster
- Allocricetulus eversmanni - Eversmann's hamster
Genus Cansumys
- Cansumys canus - Gansu hamster
Genus Cricetulus
- Cricetulus barabensis - Chinese striped hamster
- Cricetulus griseus - Chinese hamster
- Cricetulus lama - Lama dwarf hamster
- Cricetulus longicaudatus - long-tailed ratlike hamster
- Cricetulus sokolovi - Sokolov's ratlike hamster
Genus Cricetus
- Cricetus cricetus - European hamster or black-bellied hamster
Genus Mesocricetus
- Mesocricetus auratus - golden hamster
- Mesocricetus brandti - Turkish hamster
- Mesocricetus newtoni - Romanian hamster
- Mesocricetus raddei - Ciscaucasian hamster
Genus Nothocricetulus
- Nothocricetulus migratorius - grey ratlike hamster
Genus Phodopus
- Phodopus campbelli - Campbell's dwarf hamster
- Phodopus roborovski - Roborovski's (desert) dwarf hamster
- Phodopus sungorus - winter white (Dzhungarian) dwarf hamster
Genus Tscherskia
- Tscherskia triton - greater long-tailed hamster
Genus Urocricetus
- Urocricetus alticola - Tibetan ratlike hamster
- Urocricetus kamensis - Kam ratlike hamster

Subfamily Arvicolinae

Genus Alticola
- Alticola albicaudus - white-tailed mountain vole
- Alticola argentatus - silver mountain vole
- Alticola barakshin - Gobi Altai mountain vole
- Alticola lemminus - lemming vole
- Alticola macrotis - large-eared vole
- Alticola montosa - Central Kashmir vole
- Alticola olchonensis - Lake Baikal mountain vole
- Alticola roylei - Royle's mountain vole
- Alticola semicanus - Mongolian silver vole
- Alticola stoliczkanus - Stoliczka's mountain vole
- Alticola strelzowi - flat-headed vole
- Alticola tuvinicus - Tuva silver vole
Genus Arborimus
- Arborimus albipes - white-footed vole
- Arborimus longicaudus - red tree vole
- Arborimus pomo - Sonoma tree vole
Genus Arvicola
- Arvicola amphibius - European (or northern) water vole
- Arvicola sapidus - southwestern (or southern) water vole
- Arvicola scherman - montane water vole
Genus Blanfordimys
- Blanfordimys afghanus - Afghan vole
- Blanfordimys bucharicus - Bucharian vole
- Blanfordimys juldaschi - juniper vole
Genus Caryomys
- Caryomys eva - Eva's red-backed vole
- Caryomys inez - Inez's red-backed vole
Genus Chionomys
- Chionomys gud - Caucasian snow vole
- Chionomys nivalis - European snow vole
- Chionomys roberti - Robert's snow vole
Genus Dicrostonyx
- Dicrostonyx exsul? - St Lawrence Island collared lemming
- Dicrostonyx groenlandicus - northern collared lemming
- Dicrostonyx hudsonius - Ungava collared lemming
- Dicrostonyx kilangmiutak? - Victoria collared lemming
- Dicrostonyx nelsoni - Nelson's collared lemming
- Dicrostonyx nunatakensis - Ogilvie Mountain collared lemming
- Dicrostonyx richardsoni - Richardson's collared lemming
- Dicrostonyx rubricatus? - Bering collared lemming
- Dicrostonyx torquatus - Arctic lemming
- Dicrostonyx unalascensis - Unalaska collared lemming
- Dicrostonyx vinogradovi? - Wrangel lemming
Genus Dinaromys
- Dinaromys bogdanovi - Balkan snow vole or Martino's snow vole
Genus Ellobius
- Ellobius alaicus - Alai mole vole
- Ellobius fuscocapillus - southern mole vole
- Ellobius lutescens - Transcaucasian mole vole
- Ellobius talpinus - northern mole vole
- Ellobius tancrei - Zaisan mole vole
Genus Eolagurus
- Eolagurus luteus - yellow steppe lemming
- Eolagurus przewalskii - Przewalski's steppe lemming
Genus Eothenomys
- Eothenomys cachinus - Kachin red-backed vole
- Eothenomys chinensis - Pratt's vole
- Eothenomys custos - southwest China vole
- Eothenomys melanogaster - Pere David's vole
- Eothenomys miletus - Yunnan red-backed vole
- Eothenomys olitor - Chaotung vole
- Eothenomys proditor - Yulungshan vole
- Eothenomys wardi - Ward's red-backed vole
Genus Hyperacrius
- Hyperacrius fertilis - True's vole
- Hyperacrius wynnei - Murree vole
Genus Lagurus
- Lagurus lagurus - steppe lemming
Genus Lasiopodomys
- Lasiopodomys brandtii - Brandt's vole
- Lasiopodomys fuscus - plateau vole
- Lasiopodomys mandarinus - Mandarin vole
Genus Lemmiscus
- Lemmiscus curtatus - sagebrush vole
Genus Lemmus
- Lemmus amurensis - Amur lemming
- Lemmus lemmus - Norway lemming
- Lemmus nigripes - Beringian lemming
- Lemmus paulus - Wrangel Island lemming
- Lemmus sibiricus - Siberian brown lemming
- Lemmus trimucronatus - North American brown lemming
Genus Microtus
- Subgenus Microtus
  - Microtus agrestis - field vole
  - Microtus anatolicus - Anatolian vole
  - Microtus arvalis - common vole
  - Microtus cabrerae - Cabrera's vole
  - Microtus dogramacii - Doğramaci's vole
  - Microtus elbeyli - Elbeyli vole
  - Microtus guentheri - Günther's vole
  - Microtus hartingii? - Harting's vole?
  - Microtus ilaeus - Tien Shan vole
  - Microtus irani - Persian vole
  - Microtus kermanensis? - Baluchistan vole
  - Microtus lavernedii - Mediterranean field vole
  - Microtus levis - Southern vole
  - Microtus lydius - Turkish vole
  - Microtus mystacinus - East European vole
  - Microtus obscurus? - Altai vole
  - Microtus paradoxus - Paradox vole
  - Microtus qazvinensis - Qazvin vole
  - Microtus rosianus? - Portuguese field vole?
  - Microtus schidlovskii - Schidlovsky's vole
  - Microtus socialis - social vole
  - Microtus transcaspicus - Transcaspian vole
- Subgenus Alexandromys
  - Microtus clarkei - Clarke's vole
  - Microtus evoronensis - evorsk vole
  - Microtus fortis - reed vole
  - Microtus gerbii - Gerbe's vole
  - Microtus kikuchii - Taiwan vole
  - Microtus limnophilus - lacustrine vole
  - Microtus maximowiczii - Maximowicz's vole
  - Microtus middendorffi - Middendorf's vole
  - Microtus mongolicus - Mongolian vole
  - Microtus montebelli - Japanese grass vole
  - Microtus mujanensis - muisk vole
  - Microtus oeconomus - tundra vole
  - Microtus sachalinensis - Sakhalin vole
- Subgenus Hyrcanicola
  - Microtus schelkovnikovi - Schelkovnikov's pine vole
- Subgenus Mynomes
  - Microtus breweri - beach vole
  - Microtus canicaudus - gray-tailed vole
  - Microtus drummondi - Western meadow vole
  - Microtus dukecampbelli - Florida salt marsh vole
  - Microtus montanus - montane vole
  - Microtus oregoni - creeping vole
  - Microtus pennsylvanicus - meadow vole
  - Microtus townsendii - Townsend's vole
- Subgenus Pedomys
  - Microtus ochrogaster - prairie vole
- Subgenus Pitymys
  - Microtus guatemalensis - Guatemalan vole
  - Microtus oaxacensis - Tarabundi vole
  - Microtus pinetorum - woodland vole
  - Microtus quasiater - Jalapan pine vole
- Subgenus Stenocranius
  - Microtus gregalis - narrow-headed vole
- Subgenus Terricola
  - Microtus bavaricus - Bavarian pine vole
  - Microtus brachycercus - Calabria pine vole
  - Microtus daghestanicus - Daghestan pine vole
  - Microtus duodecimcostatus - Mediterranean pine vole
  - Microtus felteni - Felten's vole
  - Microtus liechtensteini - Lichtenstein's pine vole
  - Microtus lusitanicus - Lusitanian pine vole
  - Microtus majori - Major's pine vole
  - Microtus multiplex - alpine pine vole
  - Microtus nebrodensis? - Sicilian pine vole?
  - Microtus savii - Savi's pine vole
  - Microtus subterraneus - European pine vole
  - Microtus tatricus - Tatra pine vole
  - Microtus thomasi - Thomas's pine vole
- Subgenus incertae sedis
  - Microtus abbreviatus - insular vole
  - Microtus californicus - California vole
  - Microtus chrotorrhinus - rock vole
  - Microtus longicaudus - long-tailed vole
  - Microtus mexicanus - Mexican vole
  - Microtus miurus - singing vole
  - Microtus mogollonensis? - Mogollon vole?
  - Microtus richardsoni - water vole
  - Microtus umbrosus - Zempoaltepec vole
  - Microtus xanthognathus - taiga vole
- Others Microtus "Species"
  - Microtus hyperboreus? - North Siberian vole
  - Microtus kirgisorum? - Tien Shan vole
  - Microtus nasarovi? - Nasarov's vole
  - Microtus rossiaemeridionalis? - southern vole
Genus Myodes
- Myodes andersoni - Japanese red-backed vole
- Myodes californicus - western red-backed vole
- Myodes centralis - Tien Shan red-backed vole
- Myodes gapperi - southern red-backed vole
- Myodes glareolus - bank vole
- Myodes imaizumii - Imaizumi's red-backed vole
- Myodes regulus - Royal vole
- Myodes rex - Hokkaido red-backed vole
- Myodes rufocanus - grey red-backed vole
- Myodes rutilus - northern red-backed vole
- Myodes shanseius - Shansei vole
- Myodes smithii - Smith's vole
- Myodes sikotanensis? - Shikotan vole
Genus Myopus
- Myopus schisticolor - wood lemming
Genus Neodon
- Neodon forresti - Forrest's mountain vole
- Neodon irene - Irene's mountain vole
- Neodon linzhiensis - Linzhi mountain vole
- Neodon sikimensis - Sikkim mountain vole
Genus Neofiber
- Neofiber alleni - round-tailed muskrat
Genus Ondatra
- Ondatra zibethicus - muskrat or musquash
Genus Phaiomys
- Phaiomys leucurus - Blyth's mountain vole
Genus Phenacomys
- Phenacomys intermedius - western heather vole
- Phenacomys ungava - eastern heather vole
Genus Proedromys
- Proedromys bedfordi - Duke Of Bedford's vole
- Proedromys liangshanensis - Liangshan vole
Genus Prometheomys
- Prometheomys schaposchnikowi - long-clawed mole vole
Genus Synaptomys
- Synaptomys borealis - northern bog lemming
- Synaptomys cooperi - southern bog lemming
Genus Volemys
- Volemys millicens - Szechuan vole
- Volemys musseri - Marie's vole

Subfamily Tylomyinae

Tribe Nyctomyini

Genus Nyctomys
- Nyctomys sumichrasti - Sumichrast's vesper rat
Genus Otonyctomys
- Otonyctomys hatti - Hatt's vesper rat

Tribe Tylomyini

Genus Ototylomys
- Ototylomys chiapensis - La Pera big-eared climbing rat
- Ototylomys phyllotis - big-eared climbing rat
Genus Tylomys
- Tylomys bullaris - Chiapan climbing rat
- Tylomys fulviventer - fulvous-bellied climbing rat
- Tylomys mirae - Mira climbing rat
- Tylomys nudicaudus - Peters's climbing rat
- Tylomys panamensis - Panamanian climbing rat
- Tylomys tumbalensis - Tumbala climbing rat
- Tylomys watsoni - Watson's climbing rat

Subfamily Neotominae

Genus Baiomys
- Baiomys brunneus - southern pygmy mouse
- Baiomys musculus - Mexican pygmy mouse
- Baiomys taylori - northern pygmy mouse or ratón-pigmeo norteño
Genus Habromys
- Habromys chinanteco - Chinanteco deer mouse
- Habromys delicatulus - delicate deermouse
- Habromys ixtlani - Ixtlán deermouse
- Habromys lepturus - slender-tailed deer mouse
- Habromys lophurus - crested-tailed deer mouse
- Habromys schmidlyi - Schmidly's deer mouse
- Habromys simulatus - Jico deer mouse
Genus Hodomys
- Hodomys alleni - Allen's woodrat
Genus Isthmomys
- Isthmomys flavidus - yellow isthmus rat
- Isthmomys pirrensis - Mt. Pirri isthmus rat
Genus Megadontomys
- Megadontomys cryophilus - Oaxaca giant deer mouse
- Megadontomys nelsoni - Nelson's giant deer mouse
- Megadontomys thomasi - Thomas's giant deer mouse
Genus Nelsonia
- Nelsonia goldmani - Nelson and Goldman's woodrat
- Nelsonia neotomodon - diminutive woodrat
Genus Neotoma
- Subgenus (Neotoma)
  - Neotoma albigula - white-throated woodrat
    - Neotoma albigula varia - Turner Island woodrat
  - Neotoma angustapalata - Tamaulipan woodrat
  - Neotoma bryanti - Bryant's woodrat
    - Neotoma bryanti anthonyi - Anthony's woodrat
    - Neotoma bryanti bunkeri - Bunker's woodrat
    - Neotoma bryanti martinensis - San Martin Island woodrat
  - Neotoma chrysomelas - Nicaraguan woodrat
  - Neotoma devia - Arizona woodrat
  - Neotoma findleyi - Findley's woodrat (extinct)
  - Neotoma floridana - Florida woodrat or eastern woodrat
    - Neotoma floridana smalli - Key Largo woodrat
  - Neotoma goldmani - Goldman's woodrat
  - Neotoma insularis - Angel de la Guarda woodrat
  - Neotoma lepida - desert woodrat
  - Neotoma leucodon - White-toothed woodrat
  - Neotoma macrotis - big-eared woodrat
  - Neotoma magister - Allegheny woodrat
  - Neotoma mexicana - Mexican woodrat
  - Neotoma micropus - southern plains woodrat
  - Neotoma nelsoni - Nelson's woodrat
  - Neotoma palatina - Bolaos woodrat
  - Neotoma stephensi - Stephens's woodrat
- Subgenus (Teanopus)
  - Neotoma phenax - Sonoran woodrat
- Subgenus (Teonoma)
  - Neotoma cinerea - bushy-tailed woodrat
  - Neotoma fuscipes - dusky-footed woodrat
Genus Neotomodon
- Neotomodon alstoni - Mexican volcano mouse
Genus Ochrotomys
- Ochrotomys nuttalli - golden mouse
Genus Onychomys
- Onychomys arenicola - Mearns's grasshopper mouse
- Onychomys leucogaster - northern grasshopper mouse
- Onychomys torridus - southern grasshopper mouse
Genus Osgoodomys
- Osgoodomys banderanus - Michoacan deer mouse
Genus Peromyscus
- californicus group
  - Peromyscus californicus - California deermouse
- eremicus group
  - Peromyscus caniceps - Burt's deer mouse
  - Peromyscus dickeyi - Dickey's deer mouse
  - Peromyscus eremicus - cactus mouse
  - Peromyscus eva - Eva's desert mouse
  - Peromyscus fraterculus - Northern Baja deer mouse
  - Peromyscus guardia - Angel Island mouse [possibly extinct]
  - Peromyscus interparietalis - San Lorenzo mouse
  - Peromyscus merriami - mesquite mouse
  - Peromyscus pembertoni - Pemberton's deer mouse [extinct]
  - Peromyscus pseudocrinitus - false canyon mouse
- hooperi group
  - Peromyscus hooperi - Hooper's mouse
- crinitus group
  - Peromyscus crinitus - canyon mouse
- maniculatus group
  - Peromyscus arcticus - Yukon deer mouse
  - Peromyscus gambellii - Gambel's deer mouse
  - Peromyscus keeni - Northwestern deer mouse
  - Peromyscus labecula - Southern deer mouse
  - Peromyscus maniculatus - Eastern deer mouse
  - Peromyscus melanotis - black-eared mouse
  - Peromyscus nesodytes - (Extinct)
  - Peromyscus oreas? - Columbian mouse
  - Peromyscus polionotus - oldfield mouse
    - Peromyscus polionotus decoloratus - Pallid beach mouse (extinct)
    - Peromyscus polionotus phasma - Anastasia Island beach mouse
  - Peromyscus sejugis - Santa Cruz mouse
  - Peromyscus sitkensis? - Sitka mouse
  - Peromyscus slevini - Slevin's mouse
  - Peromyscus sonoriensis - Western deer mouse
- leucopus group
  - Peromyscus gossypinus - cotton mouse
    - Peromyscus gossypinus allapaticola - Key Largo cotton mouse
    - Peromyscus gossypinus restrictus - Chadwick Beach cotton mouse (extinct)
  - Peromyscus leucopus - white-footed mouse
- aztecus group
  - Peromyscus aztecus - Aztec mouse
  - Peromyscus hylocetes - Transvolcanic deer mouse
  - Peromyscus oaxacensis - Oaxacan deer mouse
  - Peromyscus spicilegus - gleaning mouse
  - Peromyscus winkelmanni - Winkelmann's mouse
- boylii group
  - Peromyscus beatae - Orizaba deer mouse
  - Peromyscus boylii - brush mouse
  - Peromyscus carletoni - Carleton's deer mouse
  - Peromyscus kilpatricki - Kilpatrick's deer mouse
  - Peromyscus levipes - nimble-footed mouse
  - Peromyscus madrensis - Tres Marias Island mouse
  - Peromyscus polius - Chihuahuan mouse
  - Peromyscus sagax - La Palma deer mouse
  - Peromyscus schmidlyi - Schmidly's deer mouse
  - Peromyscus simulus - Nayarit mouse
  - Peromyscus stephani - San Eseban Island mouse
- truei group
  - Peromyscus attwateri - Texas mouse
  - Peromyscus bullatus - Perote mouse
  - Peromyscus difficilis - Zacatecan deer mouse
  - Peromyscus gratus - Osgood's mouse
  - Peromyscus laceianus - Northern white-ankled mouse
  - Peromyscus nasutus - northern rock mouse
  - Peromyscus ochraventer - El Carrizo deer mouse
  - Peromyscus pectoralis - Southern white-ankled mouse
  - Peromyscus truei - pinyon mouse
- melanophrys group
  - Peromyscus melanophrys - plateau mouse
  - Peromyscus mekisturus - Puebla deer mouse
  - Peromyscus perfulvus - marsh mouse
- furvus group
  - Peromyscus furvus - blackish deer mouse
  - Peromyscus latirostris - Wide-rostrum deer mouse
- megalops group
  - Peromyscus megalops - brown deer mouse
  - Peromyscus melanocarpus - Zempoaltepec
  - Peromyscus melanurus - black-tailed mouse
- mexicanus group
  - Peromyscus bakeri - Baker's deer mouse
  - Peromyscus carolpattonae - Carol Patton's deer-mouse
  - Peromyscus gardneri - Gardner's deer-mouse
  - Peromyscus grandis - big deer mouse
  - Peromyscus guatemalensis - Guatemalan deer mouse
  - Peromyscus gymnotis - naked-eared deer mouse
  - Peromyscus mayensis - Maya mouse
  - Peromyscus mexicanus - Mexican deer mouse
  - Peromyscus nicaraguae - Nicaraguan deer mouse
  - Peromyscus nudipes - Talamancan deer mouse
  - Peromyscus salvadorensis - Salvadoran deer mouse
  - Peromyscus stirtoni - Stirton's deer mouse
  - Peromyscus tropicalis - Chimoxan deer mouse
  - Peromyscus yucatanicus - Yucatán deer mouse
  - Peromyscus zarhynchus - Chiapan deer mouse
Genus Podomys
- Podomys floridanus - Florida mouse
Genus Reithrodontomys
- Reithrodontomys bakeri - Guerrero harvest mouse
- Reithrodontomys brevirostris - short-nosed harvest mouse
- Reithrodontomys burti - Sonoran harvest mouse
- Reithrodontomys chrysopsis - volcano harvest mouse
- Reithrodontomys creper - Chiriqui harvest mouse
- Reithrodontomys darienensis - Darien harvest mouse
- Reithrodontomys fulvescens - fulvous harvest mouse
- Reithrodontomys gracilis - slender harvest mouse
- Reithrodontomys hirsutus - hairy harvest mouse
- Reithrodontomys humulis - eastern harvest mouse
- Reithrodontomys megalotis - western harvest mouse
- Reithrodontomys mexicanus - Mexican harvest mouse
- Reithrodontomys microdon - small-toothed harvest mouse
- Reithrodontomys montanus - plains harvest mouse
- Reithrodontomys musseri - Small harvest mouse
- Reithrodontomys paradoxus - Nicaraguan harvest mouse
- Reithrodontomys raviventris - saltmarsh harvest mouse
- Reithrodontomys rodriguezi - Rodriguez's harvest mouse
- Reithrodontomys spectabilis - Cozumel harvest mouse
- Reithrodontomys sumichrasti - Sumichrast's harvest mouse
- Reithrodontomys tenuirostris - narrow-nosed harvest mouse
- Reithrodontomys zacatecae - Zacatecas harvest mouse
Genus Scotinomys
- Scotinomys teguina - Alston's brown mouse
- Scotinomys xerampelinus - Chiriqui brown mouse
Genus Xenomys
- Xenomys nelsoni - Magdalena rat

Subfamily Sigmodontinae

Genus Delomys
- Delomys collinus - montane delomys
- Delomys dorsalis - striped Atlantic forest rat
- Delomys sublineatus - pallid Atlantic forest rat
Genus Irenomys
- Irenomys tarsalis - Chilean climbing mouse
Genus Juliomys
- Juliomys anoblepas (extinct)
- Juliomys ossitenuis - Delicate red-nosed tree mouse
- Juliomys pictipes - Contreras' juliomys
- Juliomys rimofrons - cleft-headed juliomys
- Juliomys ximenezi - Aracuaria Forest tree mouse
Genus Phaenomys
- Phaenomys ferrugineus - Rio de Janeiro arboreal rat
Genus Punomys
- Punomys kofordi - eastern puna mouse
- Punomys lemminus - puna mouse
Genus Wiedomys
- Wiedomys cerradensis - Cerrado red-nosed mouse
- Wiedomys pyrrhorhinos - red-nosed mouse
Genus Wilfredomys
- Wilfredomys oenax - greater Wilfred's mouse

Tribe Abrotrichini

Genus Abrothrix
- Abrothrix andinus - Andean akodont
- Abrothrix hershkovitzi - Hershkovitz's akodont
- Abrothrix hirta - Hairy soft-haired mouse
- Abrothrix illuteus - gray akodont
- Abrothrix jelskii - ornate akodont
- Abrothrix lanosus - woolly akodont
- Abrothrix longipilis - long-haired akodont
- Abrothrix manni - Mann's soft-haired mouse
- Abrothrix olivaceus - Manso grass mouse
  - Abrothrix olivaceus markhami - Wellington akodont
- Abrothrix sanborni - Sanborn's akodont
- Abrothrix xanthorhina
Genus Chelemys
- Chelemys delfini - Magellanic long-clawed akodont
- Chelemys macronyx - Andean long-clawed mouse
- Chelemys megalonyx - large long-clawed mouse
Genus Geoxus
- Geoxus annectens - Pearson's long-clawed akodont
- Geoxus valdivianus - long-clawed mole mouse
Genus Notiomys
- Notiomys edwardsii - Edward's long-clawed mouse

Tribe Akodontini

Genus Akodon
- Akodon aerosus - Yungas akodont
- Akodon affinis - Cordillera Occidental akodont
- Akodon albiventer - white-bellied akodont
- Akodon azarae - Azara's akodont
- Akodon boliviensis - Bolivian akodont
- Akodon budini - Budin's akodont
- Akodon caenosus- unicolored grass mouse
- Akodon cursor - cursorial akodont
- Akodon dayi - dusky akodont
- Akodon dolores - Córdoba akodont
- Akodon fumeus - smoky akodont
- Akodon glaucinus
- Akodon iniscatus - Patagonian akodont
- Akodon juninensis - Junín akodont
- Akodon kofordi - Koford's akodont
- Akodon lindberghi - Lindbergh's akodont
- Akodon lutescens - Altiplano akodont
- Akodon mimus - hocicudo-like akodont
- Akodon molinae - Molina's grass mouse
- Akodon mollis - soft-furred akodont
- Akodon montensis - montane akodont
- Akodon mystax - Caparaó akodont
- Akodon neocenus - Neuquén akodont
- Akodon orophilus - Utcubamba akodont
- Akodon paranaensis - Paraná akodont
- Akodon pervalens - Tarija akodont
- Akodon philipmyersi - Philip Myers' akodont
- Akodon polopi - Polop's grass mouse
- Akodon reigi - Reig's akodont
- Akodon sanctipaulensis - São Paulo akodont
- Akodon serrensis - Serra do Mar akodont
- Akodon siberiae - Cochabamba akodont
- Akodon simulator - white-throated akodont
- Akodon spegazzinii - Spegazzini's akodont
- Akodon subfuscus - Puno akodont
- Akodon surdus - slate-bellied akodont
- Akodon sylvanus - woodland akodont
- Akodon tartareus
- Akodon toba - Toba akodont
- Akodon torques - cloud forest grass akodont
- Akodon varius - variable akodont
Genus Bibimys
- Bibimys chacoensis - Chaco crimson-nosed rat
- Bibimys labiosus - large-lipped crimson-nosed rat
- Bibimys torresi - Torres' crimson-nosed rat
Genus Blarinomys
- Blarinomys breviceps - Brazilian shrew-mouse
Genus Brucepattersonius
- Brucepattersonius albinasus? - white-nosed brucie
- Brucepattersonius griserufescens - gray-bellied brucie
- Brucepattersonius guarani - Guaraní brucie
- Brucepattersonius igniventris - red-bellied brucie
- Brucepattersonius iheringi - Ihering's hocicudo
- Brucepattersonius misionensis - Misiones brucie
- Brucepattersonius paradisus - Arroyo of Paradise brucie
- Brucepattersonius soricinus - Soricine brucie
Genus Deltamys
- Deltamys kempi - Kemp's akodont
Genus Gyldenstolpia
- Gyldenstolpia fronto - fossorial giant rat
- Gyldenstolpia planaltensis - Cerrado giant rat
Genus Juscelinomys
- Juscelinomys candango - Brasilia burrowing mouse or candango mouse (extinct)
- Juscelinomys guaporensis - Rio Guapore burrowing mouse
- Juscelinomys huanchacae - Huanchaca akodont
- Juscelinomys talpinus - molelike mouse
Genus Kunsia
- Kunsia tomentosus - woolly giant rat
Genus Lenoxus
- Lenoxus apicalis - Andean rat
Genus Necromys
- Necromys amoenus - pleasant bolo mouse
- Necromys benefactus - Argentine bolo mouse
- Necromys lactens - rufous-bellied bolo mouse
- Necromys lasiurus - hairy-tailed bolo mouse
- Necromys lenguarum - Paraguayan bolo mouse
- Necromys obscurus - dark bolo mouse
- Necromys punctulatus - spotted bolo mouse
- Necromys temchuki - Temchuk's bolo mouse
- Necromys urichi - northern grass mouse
Genus Neomicroxus
- Neomicroxus bogotensis - Bogotá akodont
- Neomicroxus latebricola - Ecuadorian akodont
Genus Oxymycterus
- Oxymycterus akodontius - Argentine hocicudo
- Oxymycterus amazonicus - Amazon hocicudo
- Oxymycterus angularis - angular hocicudo
- Oxymycterus caparaoe - Caparao hocicudo
- Oxymycterus dasytrichus - Atlantic Forest hocicudo
- Oxymycterus delator - spy hocicudo
- Oxymycterus hiska - small hocicudo
- Oxymycterus hispidus - hispid hocicudo
- Oxymycterus hucucha - Quechuan hocicudo
- Oxymycterus inca - Incan hocicudo
- Oxymycterus itapeby - Itapevi hocicudo rat
- Oxymycterus josei - Jose's hocicudo
- Oxymycterus nasutus - long-nosed hocicudo
- Oxymycterus paramensis - paramo hocicudo
- Oxymycterus quaestor - Quaestor hocicudo
- Oxymycterus roberti - Robert's hocicudo
- Oxymycterus rufus - red hocicudo
- Oxymycterus wayku - Ravine hocicudo
Genus Podoxymys
- Podoxymys roraimae - Roraima mouse
Genus Scapteromys
- Scapteromys aquaticus - Argentine swamp rat
- Scapteromys meridionalis - Plateau swamp rat
- Scapteromys tumidus - swamp rat
Genus Thalpomys
- Thalpomys cerradensis - cerrado mouse
- Thalpomys lasiotis - hairy-eared cerrado mouse
Genus Thaptomys
- Thaptomys nigrita - blackish grass mouse

Tribe Ichthyomyini

Genus Anotomys
- Anotomys leander - Ecuador fish-eating rat
Genus Chibchanomys
- Chibchanomys orcesi - Las Cajas ichthyomyine
- Chibchanomys trichotis - Chibchan water mouse
Genus Ichthyomys
- Ichthyomys hydrobates - crab-eating rat
- Ichthyomys pittieri - Pittier's crab-eating rat
- Ichthyomys stolzmanni - Stolzmann's crab-eating rat
- Ichthyomys tweedii - Tweedy's crab-eating rat
Genus Neusticomys
- Neusticomys ferreirai - Ferreira's fish-eating rat
- Neusticomys monticolus - montane fish-eating rat
- Neusticomys mussoi - Musso's fish-eating rat
- Neusticomys oyapocki - Oyapock's fish-eating rat
- Neusticomys peruviensis - Peruvian fish-eating rat
- Neusticomys venezuelae - Venezuelan fish-eating rat
- Neusticomys vossi - Voss's fish-eating rat
Genus Rheomys
- Rheomys mexicanus - Mexican water mouse
- Rheomys raptor - Goldman's water mouse
- Rheomys thomasi - Thomas's water mouse
- Rheomys underwoodi - Underwood's water mouse

Tribe Oryzomyini

Genus Aegialomys
- Aegialomys galapagoensis - Galápagos rice rat
- Aegialomys xanthaeolus - Yellowish rice rat
Genus Amphinectomys
- Amphinectomys savamis - Ucayali water rat
Genus Cerradomys
- Cerradomys akroai - Akroa rice rat
- Cerradomys goytaca - Goytaca rice rat
- Cerradomys langguthi - Langguth's rice rat
- Cerradomys maracajuensis - Maracaju oryzomys
- Cerradomys marinhus - Marinho's rice rat
- Cerradomys scotti - Lindbergh's oryzomys
- Cerradomys subflavus - Flavescent oryzomys
- Cerradomys vivoi - Vivo's rice rat
Genus Drymoreomys
- Drymoreomys albimaculatus - White-throated montane forest rat
Genus Eremoryzomys
- Eremoryzomys polius - gray rice rat
Genus Euryoryzomys
- Euryoryzomys emmonsae - Emmons' rice rat
- Euryoryzomys lamia - monster rice rat
- Euryoryzomys legatus - big-headed rice rat
- Euryoryzomys macconnelli - MacConnell's rice rat
- Euryoryzomys nitidus - elegant rice rat
- Euryoryzomys russatus - russet rice rat
Genus Handleyomys
- Handleyomys alfaroi - Alfaro's rice rat
- Handleyomys chapmani - Chapman's rice rat
- Handleyomys fuscatus - dusky-footed montane mouse
- Handleyomys intectus - Colombian rice rat
- Handleyomys melanotis - black-eared rice rat
- Handleyomys rhabdops - striped rice rat
- Handleyomys rostratus - long-nosed rice rat
- Handleyomys saturatior - cloud forest rice rat
Genus Holochilus
- Holochilus brasiliensis - Brazilian marsh rat
- Holochilus chacarius - Chacoan marsh rat
- Holochilus nanus - Amazonian marsh rat
- Holochilus oxe - Brazilian North-eastern marsh rat
- Holochilus sciureus - Cerrado marsh rat
Genus Hylaeamys
- Hylaeamys acritus - Bolivian rice rat
- Hylaeamys laticeps - Atlantic Forest oryzomys
- Hylaeamys megacephalus - Azara's broad-headed oryzomys
- Hylaeamys oniscus - sowbug rice rat
- Hylaeamys perenensis - western Amazonian oryzomys
- Hylaeamys tatei - Tate's oryzomys
- Hylaeamys yunganus - Yungas rice rat
Genus Lundomys
- Lundomys molitor - Lund's amphibious rat
Genus Megalomys
- Megalomys audreyae - Barbuda giant rice-rat (Extinct)
- Megalomys curazensis - (Extinct)
- Megalomys desmarestii - Desmarest's pilorie (extinct)
- Megalomys georginae - Barbados giant rice rat (extinct)
- Megalomys luciae - Saint Lucia pilorie (extinct)
Genus Melanomys
- Melanomys caliginosus - dusky melanomys
- Melanomys robustulus - robust melanomys
- Melanomys zunigae - Zuniga's melanomys
Genus Microakodontomys
- Microakodontomys transitorius - Transitional colilargo
Genus Microryzomys
- Microryzomys altissimus - Páramo colilargo
- Microryzomys minutus - montane colilargo
Genus Mindomys
- Mindomys hammondi - Hammond's rice rat
- Mindomys kutuku - Kutukú rat
Genus Neacomys
- Neacomys aletheia - Upper Juruá bristly mouse
- Neacomys amoenus - pleasant bristly mouse
- Neacomys dubosti - Dubost's bristly mouse
- Neacomys elieceri - Eliecer's bristly mouse
- Neacomys guianae - Guiana bristly mouse
- Neacomys jau - Jaú bristly mouse
- Neacomys macedoruizi - Macedo Ruiz's bristly mouse
- Neacomys marajoara - Marajó bristly mouse
- Neacomys minutus - small bristly mouse
- Neacomys musseri - Musser's bristly mouse
- Neacomys paracou - Paracou bristly mouse
- Neacomys pictus - painted bristly mouse
- Neacomys rosalindae - Rosalind's bristly mouse
- Neacomys serranensis - Serrano bristly mouse
- Neacomys spinosus - large bristly mouse
- Neacomys tenuipes - narrow-footed bristly mouse
- Neacomys vargasllosai - Vargas Llosa's bristly mouse
- Neacomys vossi - Voss's bristly mouse
- Neacomys xingu - Xingu bristly mouse
Genus Nectomys
- Nectomys apicalis - western Amazonian nectomys
- Nectomys magdalenae - Magdalena-Cauca water rat
- Nectomys palmipes - Trinidad nectomys
- Nectomys rattus - small-footed bristly mouse
- Nectomys squamipes - Atlantic Forest nectomys
Genus Nephelomys
- Nephelomys albigularis - white-throated oryzomys
- Nephelomys auriventer - golden-bellied oryzomys
- Nephelomys caracolus - Costa Central oryzomys
- Nephelomys childi - Child's rice rat
- Nephelomys devius - Talamancan oryzomys
- Nephelomys keaysi - Keays's oryzomys
- Nephelomys levipes - nimble-footed oryzomys
- Nephelomys maculiventer - Santa Marta rice rat
- Nephelomys meridensis - Mérida oryzomys
- Nephelomys moerex - gray-bellied rice rat
- Nephelomys nimbosus - lesser golden-bellied rice rat
- Nephelomys pectoralis - Western Colombian rice rat
- Nephelomys pirrensis - Mount Pirre rice rat
- Nephelomys ricardopalmai - Ricardo Palma's rice rat
Genus Nesoryzomys
- Nesoryzomys darwini - Darwin's nesoryzomys (extinct
- Nesoryzomys fernandinae - Fernandina nesoryzomys
- Nesoryzomys indefessus - Indefatigable Galápagos mouse (extinct)
- Nesoryzomys narboroughi - large Fernandina Galapagos mouse
- Nesoryzomys swarthi - Santiago nesoryzomys
Genus Noronhomys
- Noronhomys vespuccii - Vespucci's rodent (extinct)
Genus Oecomys
- Oecomys auyantepui - north Amazonian arboreal rice rat
- Oecomys bicolor - bicolored arboreal rice rat
- Oecomys catherinae - Atlantic Forest oecomys
- Oecomys cleberi - Cleber's oecomys
- Oecomys concolor - unicolored arboreal rice rat
- Oecomys flavicans - yellow arboreal rice rat
- Oecomys mamorae - Mamore arboreal rice rat
- Oecomys paricola - Brazilian arboreal rice rat
- Oecomys phaeotis - dusky arboreal rice rat
- Oecomys rex - king arboreal rice rat
- Oecomys roberti - Robert's arboreal rice rat
- Oecomys rutilus - red arboreal rice rat
- Oecomys speciosus - Venezuelan arboreal rice rat
- Oecomys superans - foothill arboreal rice rat
- Oecomys sydandersoni - Anderson's arboreal rice rat
- Oecomys trinitatis - Trinidad arboreal rice rat
Genus Oligoryzomys
- Oligoryzomys andinus - Andean colilargo
- Oligoryzomys arenalis - sandy colilargo
- Oligoryzomys brendae - Brenda's colilargo
- Oligoryzomys chacoensis - Chacoan colilargo
- Oligoryzomys destructor - destructive pygmy rice rat
- Oligoryzomys flavescens - flavescent colilargo
- Oligoryzomys fornesi - Fornes' colilargo
- Oligoryzomys fulvescens - fulvous colilargo
- Oligoryzomys griseolus - grizzled colilargo
- Oligoryzomys longicaudatus - long-tailed colilargo
- Oligoryzomys magellanicus - Magellanic pygmy rice rat
- Oligoryzomys microtis - small-eared pygmy rice rat
- Oligoryzomys moojeni - Moojen's pygmy rice rat
- Oligoryzomys nigripes - black-footed colilargo
- Oligoryzomys rupestris - Highlands pygmy rice rat
- Oligoryzomys stramineus - straw-colored pygmy rice rat
- Oligoryzomys transitorius - Synonym of Microakodontomys transitorius ?
- Oligoryzomys vegetus - sprightly colilargo
- Oligoryzomys victus - St. Vincent pygmy rice rat (extinct)
Genus Oreoryzomys
- Oreoryzomys balneator - Peruvian rice rat
Genus Oryzomys
- Oryzomys albiventer - white-bellied marsh rice rat
- Oryzomys antillarum - Jamaican rice rat (extinct)
- Oryzomys couesi - Coues's rice rat
- Oryzomys dimidiatus - Thomas's rice rat
- Oryzomys gorgasi - Gorgas's rice rat
- Oryzomys nelsoni - Tres Marias rice rat (extinct)
- Oryzomys palustris - marsh rice rat
- Oryzomys peninsulae? - Lower California rice rat (extinct)
Genus Pseudoryzomys
- Pseudoryzomys simplex - false oryzomys
Genus Scolomys
- Scolomys melanops - short-nosed scolomys
- Scolomys ucayalensis - Ucayali spiny mouse
Genus Sigmodontomys
- Sigmodontomys alfari - Alfaro's rice water rat
Genus Sooretamys
- Sooretamys angouya - Paraguayan rice rat
Genus Tanyuromys
- Tanyuromys aphrastus - Harris's rice water rat
- Tanyuromys thomasleei - Lee's long-tailed montane rat
Genus Transandinomys
- Transandinomys bolivaris - long-whiskered rice rat
- Transandinomys talamancae - Talamancan rice rat
Genus Zygodontomys
- Zygodontomys brevicauda - short-tailed zygodont
- Zygodontomys brunneus - brown zygodont

Tribe Phyllotini

Genus Andalgalomys
- Andalgalomys olrogi - Olrog's chaco mouse
- Andalgalomys pearsoni - Pearson's chaco mouse
- Andalgalomys roigi - Roig's pericote
Genus Andinomys
- Andinomys edax - Andean mouse
Genus Auliscomys
- Auliscomys boliviensis - Bolivian big-eared mouse
- Auliscomys pictus - painted big-eared mouse
- Auliscomys sublimis - Andean big-eared mouse
Genus Calomys
- Calomys boliviae - Bolivian vesper mouse
- Calomys callidus - crafty vesper mouse
- Calomys callosus - large vesper mouse
- Calomys cerqueirai - Cerqueira's vesper mouse
- Calomys expulsus - Caatinga vesper mouse
- Calomys fecundus - fecund vesper mouse
- Calomys hummelincki - Hummelinck's vesper mouse
- Calomys laucha - small vesper mouse
- Calomys lepidus - Andean vesper mouse
- Calomys musculinus - drylands vesper mouse
- Calomys sorellus - Peruvian vesper mouse
- Calomys tener - delicate vesper mouse
- Calomys tocantinsi - Tocantins vesper mouse
- Calomys venustus - Córdoba vesper mouse
Genus Chinchillula
- Chinchillula sahamae - altiplano chinchilla mouse
Genus Eligmodontia
- Eligmodontia hirtipes - hairy-footed gerbil mouse
- Eligmodontia moreni - Monte laucha
- Eligmodontia morgani - western Patagonian laucha
- Eligmodontia puerulus - Altiplano laucha
- Eligmodontia typus - eastern Patagonian laucha
Genus Galenomys
- Galenomys garleppi - Garlepp's mouse
Genus Graomys
- Graomys centralis - central pericote
- Graomys domorum - pale leaf-eared mouse
- Graomys edithae - Edith's leaf-eared mouse
- Graomys griseoflavus - gray leaf-eared mouse
Genus Loxodontomys
- Loxodontomys micropus - Southern big-eared mouse
- Loxodontomys pikumche - Pikumche pericote
Genus Phyllotis
- Phyllotis alisosiensis - Los Alisos leaf-eared mouse
- Phyllotis amicus - friendly leaf-eared mouse
- Phyllotis andium - Andean leaf-eared mouse
- Phyllotis anitae - Anita's leaf-eared mouse
- Phyllotis bonariensis - Bonaerense pericote
- Phyllotis caprinus - capricorn leaf-eared mouse
- Phyllotis darwini - Darwin's leaf-eared mouse
- Phyllotis definitus - definitive leaf-eared mouse
- Phyllotis gerbillus - gerbilline pericote
- Phyllotis haggardi - Haggard's leaf-eared mouse
- Phyllotis limatus - Lima pericote
- Phyllotis magister - master leaf-eared mouse
- Phyllotis osgoodi - Osgood's leaf-eared mouse
- Phyllotis osilae - bunchgrass leaf-eared mouse
- Phyllotis pearsoni - Pearson's leaf-eared mouse
- Phyllotis pehuenche - Pehuenche leaf-eared mouse
- Phyllotis wolffsohni - Wolffsohn's leaf-eared mouse
- Phyllotis xanthopygus - yellow-rumped leaf-eared mouse
Genus Salinomys
- Salinomys delicatus - delicate salt flat mouse
Genus Tapecomys
- Tapecomys primus - primordial tapecua

Tribe Reithrodontini

Genus Euneomys
- Euneomys chinchilloides - Patagonian chinchilla mouse
- Euneomys fossor - burrowing chinchilla mouse
- Euneomys mordax - biting chinchilla mouse
- Euneomys petersoni - Peterson's chinchilla mouse
Genus Neotomys
- Neotomys ebriosus - Andean swamp rat
Genus Reithrodon
- Reithrodon auritus - bunny rat
- Reithrodon typicus - naked-soled conyrat

Tribe Sigmodontini

Genus Sigmodon
- Subgenus Sigmodon
  - Sigmodon hispidus species group
    - Sigmodon alleni - Allen's cotton rat
    - Sigmodon arizonae - Arizona cotton rat
    - Sigmodon hirsutus - southern cotton rat
    - Sigmodon hispidus - hispid cotton rat
    - Sigmodon mascotensis - West Mexican cotton rat
    - Sigmodon ochrognathus - yellow-nosed cotton rat
    - Sigmodon planifrons - Miahuatlán cotton rat
    - Sigmodon toltecus - Toltec cotton rat
    - Sigmodon zanjonensis - montane cotton rat
  - Sigmodon fulviventer species group
    - Sigmodon fulviventer - tawny-bellied cotton rat
    - Sigmodon inopinatus - Ecuadorian cotton rat
    - Sigmodon leucotis - white-eared cotton rat
    - Sigmodon peruanus - Peruvian cotton rat
- Subgenus Sigmomys
  - Sigmodon alstoni - Alston's cotton rat

Tribe Thomasomyini

Genus Abrawayaomys
- Abrawayaomys ruschii - Ruschi's rat
Genus Aepeomys
- Aepeomys lugens - olive montane mouse
- Aepeomys reigi - Reig's aepeomys
Genus Chilomys
- Chilomys instans - Colombian forest mouse
Genus Rhagomys
- Rhagomys longilingua - long-tongued rhagomys
- Rhagomys rufescens - Brazilian arboreal mouse
Genus Rhipidomys
- Rhipidomys albujai - Albuja's climbing rat
- Rhipidomys austrinus - Southern climbing mouse
- Rhipidomys cariri - Cairi climbing mouse
- Rhipidomys caucensis - Cauca climbing mouse
- Rhipidomys couesi - Coues's climbing mouse
- Rhipidomys emiliae - Eastern Amazon climbing mouse
- Rhipidomys fulviventer - Buff-bellied climbing mouse
- Rhipidomys gardneri - Gardner's climbing mouse
- Rhipidomys ipukensis - Ipuca climbing rat
- Rhipidomys itoan - Sky climbing rat
- Rhipidomys latimanus - Broad-footed climbing mouse
- Rhipidomys leucodactylus - White-footed climbing mouse
- Rhipidomys macconnelli - MacConnell's climbing mouse
- Rhipidomys macrurus - Cerrado climbing mouse
- Rhipidomys mastacalis - Atlantic Forest climbing mouse
- Rhipidomys modicus - Peruvian climbing mouse
- Rhipidomys nitela - Splendid climbing mouse
- Rhipidomys ochrogaster - Yellow-bellied climbing mouse
- Rhipidomys similis - Greater Colombian climbing rat
- Rhipidomys tenuicauda - Turimiquire climbing rat
- Rhipidomys tribei - Tribe's climbing rat
- Rhipidomys venezuelae - Venezuelan climbing mouse
- Rhipidomys venustus - Charming climbing mouse
- Rhipidomys wetzeli - Wetzel's climbing mouse
Genus Thomasomys
- Thomasomys andersoni - Anderson's Oldfield mouse
- Thomasomys antoniobracki - Antonio Brack's Oldfield mouse
- Thomasomys apeco - Apeco Oldfield mouse
- Thomasomys aureus - golden Oldfield mouse
- Thomasomys baeops - beady-eyed mouse
- Thomasomys bombycinus - silky Oldfield mouse
- Thomasomys burneoi - Burneo's Oldfield mouse
- Thomasomys caudivarius - white-tipped Oldfield mouse
- Thomasomys cinereiventer - ashy-bellied Oldfield mouse
- Thomasomys cinereus - ash-colored Oldfield mouse
- Thomasomys cinnameus - cinnamon-colored Oldfield mouse
- Thomasomys daphne - Daphne's Oldfield mouse
- Thomasomys eleusis - Peruvian Oldfield mouse
- Thomasomys erro - wandering Oldfield mouse
- Thomasomys gracilis - slender Oldfield mouse
- Thomasomys hudsoni - Hudson's Oldfield mouse
- Thomasomys hylophilus - woodland Oldfield mouse
- Thomasomys incanus - Inca Oldfield mouse
- Thomasomys ischyrus - long-tailed Oldfield mouse
- Thomasomys kalinowskii - Kalinowski's Oldfield mouse
- Thomasomys ladewi - Ladew's Oldfield mouse
- Thomasomys laniger - soft-furred Oldfield mouse
- Thomasomys macrotis - large-eared Oldfield mouse
- Thomasomys monochromos - unicolored Oldfield mouse
- Thomasomys niveipes - snow-footed Oldfield mouse
- Thomasomys notatus - distinguished Oldfield mouse
- Thomasomys onkiro - Ashaninka Oldfield mouse
- Thomasomys oreas - montane Oldfield mouse
- Thomasomys paramorum - paramo Oldfield mouse
- Thomasomys pardignasi - Pardiñas's Oldfield mouse
- Thomasomys popayanus - Popayán Oldfield mouse
- Thomasomys praetor - Cajamarca Oldfield mouse
- Thomasomys pyrrhonotus - Thomas's Oldfield mouse
- Thomasomys rhoadsi - Rhoads's Oldfield mouse
- Thomasomys rosalinda - Rosalinda's Oldfield mouse
- Thomasomys silvestris - forest Oldfield mouse
- Thomasomys taczanowskii - Taczanowski's Oldfield mouse
- Thomasomys ucucha - ucucha thomasomys
- Thomasomys vestitus - dressy Oldfield mouse
- Thomasomys vulcani - Pichincha thomasomys

Family Muridae

Subfamily Leimacomyinae

Genus Leimacomys
- Leimacomys buettneri - Togo mouse, Büttner's African forest mouse, groove-toothed forest mouse

Subfamily Deomyinae

Genus Acomys
- Acomys airensis - western Saharan spiny mouse
- Acomys cahirinus - Cairo spiny mouse
- Acomys chudeaui - Chudeau's spiny mouse
- Acomys cilicicus - Asia Minor spiny mouse
- Acomys cineraceus - grey spiny mouse
- Acomys dimidiatus - Eastern spiny mouse
- Acomys ignitus - fiery spiny mouse
- Acomys johannis - Johan's spiny mouse
- Acomys kempi - Kemp's spiny mouse
- Acomys louisae - Louise's spiny mouse
- Acomys minous - Crete spiny mouse
- Acomys mullah - mullah spiny mouse
- Acomys muzei - Muze spiny mouse
- Acomys nesiotes - Cyprus spiny mouse
- Acomys ngurui - Nguru spiny mouse
- Acomys percivali - Percival's spiny mouse
- Acomys russatus - golden spiny mouse
- Acomys seurati - Seurat's spiny mouse
- Acomys spinosissimus - spiny mouse
- Acomys subspinosus - Cape spiny mouse
- Acomys wilsoni - Wilson's spiny mouse
Genus Deomys
- Deomys ferugineus - link rat
Genus Lophuromys
- Lophuromys angolensis - Angolan brush-furred rat
- Lophuromys ansorgei - Ansorge's brush-furred mouse
- Lophuromys aquilus - Gray brush-furred rat
- Lophuromys brevicaudus - Short-tailed brush-furred rat
- Lophuromys brunneus - Thomas's Ethiopian brush-furred rat
- Lophuromys chercherensis - Mount Chercher brush-furred rat
- Lophuromys chrysopus - Ethiopian forest brush-furred rat
- Lophuromys cinereus?
- Lophuromys dieterleni - Dieterlen's brush-furred mouse
- Lophuromys dudui - Dudu's brush-furred rat
- Lophuromys eisentrauti - Mount Lefo brush-furred mouse
- Lophuromys flavopunctatus - Yellow-spotted brush-furred rat
- Lophuromys huttereri - Hutterer's brush-furred mouse
- Lophuromys kilonzoi - Kilonzo's brush-furred rat
- Lophuromys laticeps - Albertine Rift brush-furred rat
- Lophuromys luteogaster - Yellow-bellied brush-furred rat
- Lophuromys machangui - Machandu's brush-furred rat
- Lophuromys makundii - Makundi's brush-furred rat
- Lophuromys margarettae - Margaret's brush-furred rat
- Lophuromys medicaudatus - Medium-tailed brush-furred rat
- Lophuromys melanonyx - Black-clawed brush-furred rat
- Lophuromys menageshae - North Western Rift brush-furred rat
- Lophuromys nudicaudus - Fire-bellied brush-furred rat
- Lophuromys pseudosikapusi - Sheko Forest brush-furred rat
- Lophuromys rahmi - Rahm's brush-furred rat
- Lophuromys rita - Congolese brush-furred rat
- Lophuromys roseveari - Mount Cameroon brush-furred rat
- Lophuromys sabunii - Sabuni's brush-furred rat
- Lophuromys sikapusi - Rusty-bellied brush-furred rat
- Lophuromys simensis - Simien brush-furred rat
- Lophuromys stanleyi - Stanley's brush-furred rat
- Lophuromys verhageni - Verhagen's brush-furred rat
- Lophuromys woosnami - Woosnam's brush-furred rat
- Lophuromys zena - Zena's brush-furred rat
Genus Uranomys
- Uranomys ruddi - Rudd's mouse or the white-bellied brush-furred rat

Subfamily Otomyinae

Genus Myotomys
- Myotomys sloggetti - rock karroo rat
- Myotomys unisulcatus - bush karroo rat
Genus Otomys
- Otomys anchietae - Angolan vlei rat
- Otomys angoniensis - Angoni vlei rat
- Otomys barbouri - Barbour's vlei rat
- Otomys burtoni - Burton's vlei rat
- Otomys cheesmani - Cheesman's vlei rat
- Otomys cuanzensis - Cuanza vlei rat
- Otomys dartmouthi - Ruwenzori vlei rat
- Otomys denti - Dent's vlei rat
- Otomys dollmani - Dollman's vlei rat
- Otomys fortior - Charada vlei rat
- Otomys helleri - Heller's vlei rat
- Otomys irroratus - vlei rat
- Otomys jacksoni - Mount Elgon vlei rat
- Otomys lacustris - Tanzanian vlei rat
- Otomys laminatus - laminate vlei rat
- Otomys maximus - large vlei rat
- Otomys occidentalis - western vlei rat
- Otomys orestes - Afroalpine vlei rat
- Otomys saundersiae - Saunders's vlei rat
- Otomys simiensis - Simien vlei rat
- Otomys thomasi - Thomas's vlei rat
- Otomys tropicalis - tropical vlei rat
- Otomys typus - typical vlei rat
- Otomys uzungwensis - Uzungwe vlei rat
- Otomys yaldeni - Yalden's vlei rat
- Otomys zinki - Mount Kilimanjaro vlei rat
Genus Parotomys

- Parotomys brantsii - Brants's whistling rat
- Parotomys littledalei - Littledale's whistling rat

Subfamily Gerbillinae

Genus Ammodillus
- Ammodillus imbellis - ammodile
Genus Brachiones
- Brachiones przewalskii - Przewalski's gerbil
Genus Desmodilliscus
- Desmodilliscus braueri - pouched gerbil
Genus Desmodillus
- Desmodillus auricularis - Cape short-eared gerbil
Genus Dipodillus
- Dipodillus bottai - Botta's dipodil
- Dipodillus campestris - North African dipodil
- Dipodillus dasyurus - Wagner's dipodil
- Dipodillus harwoodi - Harwood's dipodil
- Dipodillus jamesi - James's dipodil
- Dipodillus lowei - Lowe's dipodil
- Dipodillus mackilligini - Mackilligin's dipodil
- Dipodillus maghrebi - Maghreb dipodil
- Dipodillus rupicola - rupicolous dipodil
- Dipodillus simoni - Simon's dipodil
- Dipodillus somalicus - Somalian dipodil
- Dipodillus stigmonyx - Khartoum dipodil
- Dipodillus zakariai - Kerkennah Islands dipodil
Genus Gerbilliscus
- Gerbilliscus afra - Cape gerbil
- Gerbilliscus boehmi - Boehm's gerbil
- Gerbilliscus brantsii - highveld gerbil
- Gerbilliscus guineae - Guinean gerbil
- Gerbilliscus inclusus - Gorongoza gerbil
- Gerbilliscus kempi - northern savanna gerbil
- Gerbilliscus leucogaster - bushveld gerbil
- Gerbilliscus nigricaudus - black-tailed gerbil
- Gerbilliscus phillipsi - Phillips's gerbil
- Gerbilliscus robustus - fringe-tailed gerbil
- Gerbilliscus validus - southern savanna gerbil
Genus Gerbillurus
- Gerbillurus paeba - hairy-footed gerbil
- Gerbillurus setzeri - Setzer's hairy-footed gerbil
- Gerbillurus tytonis - dune hairy-footed gerbil
- Gerbillurus vallinus - bushy-tailed hairy-footed gerbil
Genus Gerbillus
- Subgenus Handecapleura
  - Gerbillus amoenus - Pleasant gerbil
  - Gerbillus brockmani - Brockman's gerbil
  - Gerbillus diminutus?
  - Gerbillus famulus - Black-tufted gerbil
  - Gerbillus garamantis - Algerian gerbil
  - Gerbillus grobbeni - Grobben's gerbil
  - Gerbillus henleyi - Pygmy gerbil
  - Gerbillus juliani?
  - Gerbillus mauritaniae - Mauritanian gerbil
  - Gerbillus mesopotamiae - Harrison's gerbil
  - Gerbillus muriculus - Darfur gerbil
  - Gerbillus nanus - Balochistan gerbil
  - Gerbillus percivali?
  - Gerbillus poecillops - Large Aden gerbil
  - Gerbillus principulus - Principal gerbil
  - Gerbillus pusillus - Least gerbil
  - Gerbillus quadrimaculatus?
  - Gerbillus ruberrimus?
  - Gerbillus syrticus - Sand gerbil
  - Gerbillus watersi - Waters's gerbil
- Subgenus Gerbillus
  - Gerbillus acticola - Berbera gerbil
  - Gerbillus agag - Agag gerbil
  - Gerbillus allenbyi?
  - Gerbillus andersoni - Anderson's gerbil
  - Gerbillus aquilus - Swarthy gerbil
  - Gerbillus bilensis?
  - Gerbillus bonhotei?
  - Gerbillus burtoni - Burton's gerbil
  - Gerbillus cheesmani - Cheesman's gerbil
  - Gerbillus cosensi?
  - Gerbillus dalloni?
  - Gerbillus dongolanus - Dongola gerbil
  - Gerbillus dunni - Dunn's gerbil
  - Gerbillus floweri - Flower's gerbil
  - Gerbillus gerbillus - Lesser Egyptian gerbil
  - Gerbillus gleadowi - Indian hairy-footed gerbil
  - Gerbillus hesperinus - Western gerbil
  - Gerbillus hoogstraali - Hoogstraal's gerbil
  - Gerbillus latastei - Lataste's gerbil
  - Gerbillus nancillus - Sudan gerbil
  - Gerbillus nigeriae - Nigerian gerbil
  - Gerbillus occiduus - Occidental gerbil
  - Gerbillus perpallidus - Pale gerbil
  - Gerbillus pulvinatus - Cushioned gerbil
  - Gerbillus pyramidum - Greater Egyptian gerbil
  - Gerbillus riggenbachi?
  - Gerbillus rosalinda - Rosalinda gerbil
  - Gerbillus tarabuli - Tarabul's gerbil
Genus Meriones
- Subgenus Meriones
  - Meriones tamariscinus - Tamarisk jird
- Subgenus Parameriones
  - Meriones persicus - Persian jird
  - Meriones rex - king jird
- Subgenus Pallasiomys
  - Meriones arimalius - Arabian jird
  - Meriones chengi - Cheng's jird
  - Meriones crassus - Sundevall's jird
  - Meriones dahli - Dahl's jird
  - Meriones grandis - Moroccan jird
  - Meriones libycus - Libyan jird
  - Meriones meridianus - midday jird
  - Meriones sacramenti - Buxton's jird
  - Meriones shawi - Shaw's jird
  - Meriones tristrami - Tristram's jird
  - Meriones unguiculatus - Mongolian jird
  - Meriones vinogradovi - Vinogradov's jird
  - Meriones zarudnyi - Zarudny's jird
- Subgenus Cheliones
  - Meriones hurrianae - Indian desert jird
Genus Microdillus
- Microdillus peeli - Somali pygmy gerbil
Genus Pachyuromys
- Pachyuromys duprasi - fat-tailed gerbil or duprasi gerbil
Genus Psammomys
- Psammomys obesus - fat sand rat
- Psammomys vexillaris - thin sand rat
Genus Rhombomys
- Rhombomys opimus - great gerbil
Genus Sekeetamys
- Sekeetamys calurus - bushy-tailed jird
Genus Tatera
- Tatera indica - Indian gerbil
Genus Taterillus
- Taterillus arenarius - Sahel gerbil
- Taterillus congicus - Congo gerbil
- Taterillus emini - Emin's gerbil
- Taterillus gracilis - slender gerbil
- Taterillus harringtoni - Harrington's gerbil
- Taterillus lacustris - Lake Chad gerbil
- Taterillus petteri - Petter's gerbil
- Taterillus pygargus - Senegal gerbil
- Taterillus tranieri - Tranieri's tateril

Subfamily Murinae

Genus Abditomys
- Abditomys latidens - Luzon broad-toothed rat
Genus Abeomelomys
- Abeomelomys sevia - Papuan abeomelomys
Genus Aethomys
- Aethomys bocagei - Bocage's rock rat
- Aethomys chrysophilus - red rock rat
- Aethomys granti - Grant's rock rat
- Aethomys hindei - Hinde's rock rat
- Aethomys ineptus - Tete veld aethomys
- Aethomys kaiseri - Kaiser's rock rat
- Aethomys namaquensis - Namaqua rock rat
- Aethomys nyikae - Nyika rock rat
- Aethomys silindensis - Silinda rock rat
- Aethomys stannarius - Tinfield's rock rat
- Aethomys thomasi - Thomas's rock rat
Genus Anisomys
- Anisomys imitator - squirrel-toothed rat
Genus Anonymomys
- Anonymomys mindorensis - Mindoro rat
Genus Apodemus
- Apodemus agrarius - striped field mouse
- Apodemus alpicola - alpine field mouse
- Apodemus argenteus - small Japanese field mouse
- Apodemus arianus? - Persian field mouse
- Apodemus avicennicus - Persian wood mouse
- Apodemus chevrieri - Chevrier's field mouse
- Apodemus draco - South China field mouse
- Apodemus epimelas - Western broad-toothed field mouse
- Apodemus flavicollis - yellow-necked mouse
- Apodemus fulvipectus? - yellow-breasted mouse
- Apodemus gurkha - Himalayan field mouse
- Apodemus hermonensis? - Mount Hermon field mouse
- Apodemus hyrcanicus - Caucasus field mouse
- Apodemus latronum - Sichuan field mouse
- Apodemus mystacinus - broad-toothed field mouse
- Apodemus pallipes - Ward's field mouse
- Apodemus peninsulae - Korean field mouse
- Apodemus ponticus - Black Sea field mouse
- Apodemus rusiges - Kashmir field mouse
- Apodemus semotus - Taiwan field mouse
- Apodemus speciosus - large Japanese field mouse
- Apodemus sylvaticus - wood mouse
- Apodemus uralensis - Ural field mouse
- Apodemus witherbyi - Steppe field mouse
Genus Apomys
- Apomys abrae - Luzon Cordillera forest mouse
- Apomys aurorae - Luzon Aurora forest mouse
- Apomys banahao - Mount Banahaw forest mouse
- Apomys brownorum - Mount Tapulao forest mouse
- Apomys camiguinensis - Camiguin forest mouse
- Apomys datae - Luzon montane forest mouse
- Apomys gracilirostris - Large Mindoro forest mouse
- Apomys hylocoetes - Mount Apo forest mouse
- Apomys insignis - Mindanao montane forest mouse
- Apomys iridensis - Mount Irid forest mouse
- Apomys littoralis - Mindanao lowland forest mouse
- Apomys lubangensis - Lubang forest mouse
- Apomys magnus - Luzon giant forest mouse
- Apomys microdon - Small Luzon forest mouse
- Apomys minganensis - Mount Mingan forest mouse
- Apomys musculus - Least forest mouse
- Apomys sacobianus - Long-nosed Luzon forest mouse
- Apomys sierrae - Sierra Madre forest mouse
- Apomys zambalensis - Luzon Zambales forest mouse
Genus Archboldomys
- Archboldomys luzonensis - Mt. Isarog shrew-mouse
- Archboldomys maximus - Large Cordillera shrew-mouse
Genus Arvicanthis
- Arvicanthis abyssinicus - Abyssinian grass rat
- Arvicanthis ansorgei - Sudanian grass rat
- Arvicanthis blicki - Blick's grass rat
- Arvicanthis nairobae - Nairobi grass rat
- Arvicanthis neumanni - Neumann's grass rat
- Arvicanthis niloticus - African grass rat
- Arvicanthis rufinus - Guinean grass rat
Genus Baiyankamys
- Baiyankamys habbema - mountain water rat
- Baiyankamys shawmayeri - Shaw Mayer's water rat
Genus Bandicota
- Bandicota bengalensis - Lesser bandicoot rat
- Bandicota indica - Greater bandicoot rat
- Bandicota savilei - Savile's bandicoot rat
Genus Batomys
- Batomys cagayanensis (extinct)
- Batomys dentatus - Large-toothed hairy-tailed rat
- Batomys granti - Luzon hairy-tailed rat
- Batomys hamiguitan - Luzon hairy-tailed rat
- Batomys russatus - Hamiguitan hairy-tailed rat
- Batomys salomonseni - Mindanao hairy-tailed rat
- Batomys uragon - Mount Isarog hairy-tailed rat
Genus Berylmys
- Berylmys berdmorei - Small white-toothed rat
- Berylmys bowersi - Bower's white-toothed rat
- Berylmys mackenziei - Kenneth's white-toothed rat
- Berylmys manipulus - Manipur white-toothed rat
Genus Brassomys
- Brassomys albidens - White-toothed brush mouse
Genus Bullimus
- Bullimus bagobus - Bagobo rat
- Bullimus carletoni - Carleton's forest rat
- Bullimus gamay - Camiguin forest rat
- Bullimus luzonicus - Large Luzon forest rat
Genus Bunomys
- Bunomys andrewsi - Andrew's hill rat
- Bunomys chrysocomus - Yellow-haired hill rat
- Bunomys coelestis - Heavenly hill rat
- Bunomys fratrorum - Fraternal hill rat
- Bunomys heinrichi?
- Bunomys karokophilus - Karoko hill rat
- Bunomys penitus - Inland hill rat
- Bunomys prolatus - Long-headed hill rat
- Bunomys torajae - Tana Toraja hill rat
Genus Carpomys
- Carpomys dakai (extinct)
- Carpomys melanurus - short-footed Luzon tree rat
- Carpomys phaeurus - white-bellied Luzon tree rat
Genus Chiromyscus
- Chiromyscus chiropus - Fea's tree rat
Genus Chiropodomys
- Chiropodomys calamianensis - Palawan pencil-tailed tree mouse
- Chiropodomys gliroides - Indomalayan pencil-tailed tree mouse
- Chiropodomys karlkoopmani - Koopman's pencil-tailed tree mouse
- Chiropodomys major - Large pencil-tailed tree mouse
- Chiropodomys muroides - Gray-bellied pencil-tailed tree mouse
- Chiropodomys pusillus - Small pencil-tailed tree mouse
- Chiropodomys maximus (Extinct)
- Chiropodomys primitivus (Extinct)
Genus Chiruromys
- Chiruromys forbesi - Greater tree mouse
- Chiruromys lamia - lamia
- Chiruromys vates - Lesser tree mouse
Genus Chrotomys
- Chrotomys gonzalesi - Isarog shrew-rat
- Chrotomys mindorensis - lowland striped shrew-rat
- Chrotomys sibuyanensis - Sibuyan striped shrew-rat
- Chrotomys silaceus - silver earth rat
- Chrotomys whiteheadi - Luzon montane shrew rat
Genus Coccymys
- Coccymys kirrhos - Tawny brush mouse
- Coccymys ruemmleri - Ruemmler's brush mouse
- Coccymys shawmayeri - Central Cordillera brush mouse
Genus Colomys
- Colomys goslingi - African water rat
Genus Congomys
- Congomys lukolelae - Lukolela swamp rat
- Congomys verschureni - Verschuren's swamp rat
Genus Conilurus
- Conilurus albipes - white-footed rabbit rat (extinct)
- Conilurus capricornensis - Capricorn rabbit rat (extinct)
- Conilurus penicillatus - brush-tailed rabbit rat
Genus Coryphomys
- Coryphomys buehleri - Buehler's rat (extinct)
- Coryphomys musseri - Timor giant rat (extinct)
Genus Crateromys
- Crateromys australis - Dinagat bushy-tailed cloud rat
- Crateromys ballik (extinct)
- Crateromys heaneyi - Panay crateromys
- Crateromys paulus - Ilin bushy-tailed cloud rat
- Crateromys schadenbergi - Luzon bushy-tailed cloud rat
Genus Cremnomys
- Cremnomys cutchicus - Cutch rat
- Cremnomys elvira - Elvira rat
Genus Crossomys
- Crossomys moncktoni - earless water rat
Genus Crunomys
- Crunomys celebensis - Celebes shrew rat
- Crunomys fallax - northern Luzon shrew rat
- Crunomys melanius - Leyte shrew rat
- Crunomys suncoides - Katanglad shrew mouse
Genus Dacnomys
- Dacnomys millardi - Millard's rat
Genus Dasymys
- Dasymys alleni - Glover Allen's dasymys
- Dasymys cabrali - Crawford-Cabral's dasymys
- Dasymys foxi - Fox's shaggy rat
- Dasymys incomtus - African marsh rat
- Dasymys montanus - montane shaggy rat
- Dasymys nudipes - Angolan marsh rat
- Dasymys robertsii - Robert's shaggy rat
- Dasymys rufulus - West African shaggy rat
- Dasymys rwandae - Rwandan dasymys
- Dasymys shortridgei
- Dasymys sua - Tanzanian dasymys
Genus Dephomys
- Dephomys defua - defua rat
- Dephomys eburneae - Ivory Coast dephomys
Genus Desmomys
- Desmomys harringtoni - Harrington's rat
- Desmomys yaldeni - Yalden's desmomys
Genus Diomys
- Diomys crumpi - Crump's mouse
Genus Diplothrix
- Diplothrix legata - Ryukyu Islands tree rat
- Diplothrix yangziensis (extinct)
Genus Echiothrix
- Echiothrix centrosa - Central Sulawesi echiothrix
- Echiothrix leucura - Sulawesi spiny rat
Genus Eropeplus
- Eropeplus canus - Sulawesi soft-furred rat
Genus Golunda
- Golunda aouraghei (extinct)
- Golunda dulamensis (extinct)
- Golunda ellioti - Indian bush rat
- Golunda gurai (extinct)
- Golunda jaegeri (extinct)
- Golunda kelleri (extinct)
- Golunda tatroticus (extinct)
Genus Grammomys
- Grammomys aridulus - arid thicket rat
- Grammomys brevirostris - short-snouted thicket rat
- Grammomys buntingi - Bunting's thicket rat
- Grammomys caniceps - gray-headed thicket rat
- Grammomys cometes - Mozambique thicket rat
- Grammomys dolichurus - woodland thicket rat
- Grammomys dryas - forest thicket rat
- Grammomys gigas - giant thicket rat
- Grammomys ibeanus - Ruwenzori thicket rat
- Grammomys kuru - eastern rainforest grammomys
- Grammomys macmillani - Macmillan's thicket rat
- Grammomys minnae - Ethiopian thicket rat
- Grammomys poensis - western rainforest grammomys
- Grammomys selousi - Selous thicket rat
- Grammomys surdaster? - African woodland thicket rat
Genus Hadromys
- Hadromys humei - Manipur bush rat
- Hadromys loujacobsi (extinct)
- Hadromys yunnanensis - Yunnan hadromys
Genus Haeromys
- Haeromys margarettae - ranee mouse
- Haeromys minahassae - Minahassa ranee mouse
- Haeromys pusillus - lesser ranee mouse
Genus Hapalomys
- Hapalomys delacouri - Delacour's marmoset rat
- Hapalomys gracilis (extinct)
- Hapalomys longicaudatus - marmoset rat
- Hapalomys suntsovi - Suntsov's marmoset rat
Genus Heimyscus
- Heimyscus fumosus - African smoky mouse
Genus Hybomys
- Hybomys badius - Cameroon highland hybomys
- Hybomys basilii - Father Basilio's striped mouse
- Hybomys lunaris - moon striped mouse
- Hybomys planifrons - Miller's striped mouse
- Hybomys trivirgatus - Temminck's striped mouse
- Hybomys univittatus - Peter's striped mouse
Genus Hydromys
- Hydromys chrysogaster - water rat or rakali
- Hydromys hussoni - Western water rat
- Hydromys neobrittanicus - New Britain water rat
- Hydromys ziegleri - Ziegler's water rat
Genus Hylomyscus
- Hylomyscus aeta - beaded wood mouse
- Hylomyscus alleni - Allen's wood mouse
- Hylomyscus anselli - Ansell's wood mouse
- Hylomyscus arcimontensis - Arc Mountain wood mouse
- Hylomyscus baeri - Baer's wood mouse
- Hylomyscus carillus - Angolan wood mouse
- Hylomyscus denniae - montane wood mouse
- Hylomyscus endorobae - Mount Kenya wood mouse
- Hylomyscus grandis - Mount Oku hylomyscus
- Hylomyscus heinrichorum - Heinrich's wood mouse
- Hylomyscus kerbispeterhansi - Kerbis Peterhans's wood mouse
- Hylomyscus mpungamachagorum - Mahale wood mouse
- Hylomyscus pamfi - Dahomey Gap wood mouse
- Hylomyscus parvus - little wood mouse
- Hylomyscus pygmaeus - Pygmy wood mouse
- Hylomyscus simus - Flat-nosed wood mouse
- Hylomyscus stanleyi - Stanley's wood mouse
- Hylomyscus stella - Stella wood mouse
- Hylomyscus thornesmithae - Mother Ellen's wood mouse
- Hylomyscus vulcanorum - Albertine Rift wood mouse
- Hylomyscus walterverheyeni - Walter Verheyeni's mouse
Genus Hyomys
- Hyomys dammermani - Western white-eared giant rat
- Hyomys goliath - Eastern white-eared giant rat
Genus Kadarsanomys
- Kadarsanomys sodyi - Sody's tree rat
Genus Komodomys
- Komodomys rintjanus - Komodo rat
Genus Lamottemys
- Lamottemys okuensis - Mt. Oku rat
Genus Leggadina
- Leggadina forresti - Forrest's mouse
- Leggadina lakedownensis - Lakeland Downs mouse
Genus Lemniscomys
- Lemniscomys barbarus - Barbary striped grass mouse
- Lemniscomys bellieri - Bellier's striped grass mouse
- Lemniscomys griselda - Griselda's striped grass mouse
- Lemniscomys hoogstraali - Hoogstral's striped grass mouse
- Lemniscomys linulus - Senegal one-striped grass mouse
- Lemniscomys macculus - buffoon striped grass mouse
- Lemniscomys mittendorfi - Mittendorf's striped grass mouse
- Lemniscomys rosalia - single-striped grass mouse
- Lemniscomys roseveari - Rosevear's striped grass mouse
- Lemniscomys striatus - typical striped grass mouse
- Lemniscomys zebra - Heuglin's lemniscomys
Genus Lenomys
- Lenomys grovesi - Groves's giant rat (extinct)
- Lenomys meyeri - trefoil-toothed giant rat
Genus Lenothrix
- Lenothrix canus - gray tree rat
Genus Leopoldamys
- Leopoldamys ciliatus - Sundaic mountain leopoldamys
- Leopoldamys diwangkarai - Diwangkara's long-tailed giant rat
- Leopoldamys edwardsi - Edwards's long-tailed giant rat
- Leopoldamys milleti - Millet's leopoldamys
- Leopoldamys neilli - Neill's long-tailed giant rat
- Leopoldamys sabanus - long-tailed giant rat
- Leopoldamys siporanus - Mentawai long-tailed giant rat
Genus Leporillus
- Leporillus apicalis - lesser stick-nest rat
- Leporillus conditor - greater stick-nest rat
Genus Leptomys
- Leptomys arfakensis - Arfak water rat
- Leptomys elegans - Long-footed water rat
- Leptomys ernstmayri - Ernst Mayr's water rat
- Leptomys paulus - Small water rat
- Leptomys signatus - Fly River water rat
Genus Limnomys
- Limnomys bryophilus - gray-bellied limnomys
- Limnomys sibuanus - Mindanao mountain rat
Genus Lorentzimys
- Lorentzimys nouhuysi - New Guinean jumping mouse
Genus Macruromys
- Macruromys elegans - western small-toothed rat
- Macruromys major - eastern small-toothed rat
Genus Madromys
- Madromys blanfordi - Blanford's madromys
Genus Malacomys
- Malacomys cansdalei - Cansdale's swamp rat
- Malacomys edwardsi - Edward's swamp rat
- Malacomys longipes - big-eared swamp rat
Genus Mallomys
- Mallomys aroaensis - De Vis's woolly rat
- Mallomys gunung - alpine woolly rat
- Mallomys istapantap - subalpine woolly rat
- Mallomys rothschildi - Rothschild's woolly rat
- Mallomys sp. nov - Bosavi woolly rat
- Mallomys sp. nov - Arfak woolly rat
- Mallomys sp. nov - Foja woolly rat
Genus Mammelomys
- Mammelomys lanosus - highland mammelomys
- Mammelomys rattoides - lowland mammelomys
Genus Margaretamys
- Margaretamys beccarii - Beccari's margareta rat
- Margaretamys christinae - Christine's margareta rat
- Margaretamys elegans - elegant margareta rat
- Margaretamys parvus - little margareta rat
Genus Mastacomys
- Mastacomys fuscus - Broad-toothed mouse
Genus Mastomys
- Mastomys angolensis - Angolan multimammate mouse
- Mastomys awashensis - Awash mastomys
- Mastomys coucha - southern multimammate mouse
- Mastomys erythroleucus - Guinea multimammate mouse
- Mastomys huberti - Hubert's mastomys
- Mastomys kollmannspergeri - Kollmannsperger's mastomys
- Mastomys natalensis - Hildebrandt's multimammate mouse
- Mastomys shortridgei - Shortridge's multimammate mouse
Genus Maxomys
- Maxomys alticola - Mountain spiny rat
- Maxomys baeodon - small Bornean maxomys
- Maxomys bartelsii - Bartels's spiny rat
- Maxomys dollmani - Dollman's spiny rat
- Maxomys hellwaldii - Hellwald's spiny rat
- Maxomys hylomyoides - Sumatran spiny rat
- Maxomys inas - Malayan mountain spiny rat
- Maxomys inflatus - Fat-nosed spiny rat
- Maxomys moi - Mo's spiny rat
- Maxomys musschenbroekii - Musschenbroek's spiny rat
- Maxomys ochraceiventer - Chestnut-bellied spiny rat
- Maxomys pagensis - Pagai spiny rat
- Maxomys panglima - Palawan spiny rat
- Maxomys rajah - Rajah spiny rat
- Maxomys surifer - Red spiny rat
- Maxomys tajuddinii - Tajuddin's spiny rat
- Maxomys wattsi - Watts's spiny rat
- Maxomys whiteheadi - Whitehead's spiny rat
Genus Melasmothrix
- Melasmothrix naso - Sulawesian shrew rat
Genus Melomys
- Melomys aerosus - dusky mosaic-tailed rat
- Melomys arcium - Rossel Island melomys
- Melomys bannisteri - Great Key Island melomys
- Melomys bougainville - Bougainville mosaic-tailed rat
- Melomys burtoni - grassland mosaic-tailed rat
- Melomys capensis - Cape York mosaic-tailed rat
- Melomys caurinus - short-tailed Talaud melomys
- Melomys cervinipes - fawn-footed mosaic-tailed rat
- Melomys cooperae - Yamdena Island melomys
- Melomys dollmani - Dollman's melomys
- Melomys fraterculus - Manusela mosaic-tailed rat
- Melomys frigicola - Snow Mountains grassland melomys
- Melomys fulgens - Seram long-tailed melomys
- Melomys howi - Riama Island melomys
- Melomys leucogaster - white-bellied mosaic-tailed rat
- Melomys lutillus - Papua grassland melomys
- Melomys matambuai - Manus Island melomys
- Melomys obiensis - Obi mosaic-tailed rat
- Melomys paveli - Pavel's Seram melomys
- Melomys rubicola - Bramble Cay mosaic-tailed rat
- Melomys rufescens - black-tailed mosaic-tailed rat
- Melomys spechti - Specht's mosaic-tailed rat
- Melomys talaudium - long-tailed Talaud melomys
Genus Mesembriomys [incomplete species listing?]
- Mesembriomys gouldii - black-footed tree-rat
- Mesembriomys macrurus - Golden-backed tree-rat
Genus Microhydromys
- Microhydromys musseri - Musser's shrew mouse
- Microhydromys richardsoni - groove-toothed shrew mouse
Genus Micromys
- Micromys bendai (extinct)
- Micromys caesaris (extinct)
- Micromys chalceus (extinct)
- Micromys cingulatus (extinct)
- Micromys coronensis (extinct)
- Micromys erythrotis - Indochinese harvest mouse
- Micromys kozaniensis (extinct)
- Micromys liui (extinct)
- Micromys minutus - Eurasian harvest mouse
- Micromys paricioi (extinct)
- Micromys praeminutus (extinct)
- Micromys steffensi (extinct)
Genus Millardia
- Millardia gleadowi - sand-colored soft-furred rat
- Millardia kathleenae - Miss Ryley's soft-furred rat
- Millardia kondana - Kondana soft-furred rat
- Millardia meltada - soft-furred rat
Genus Mirzamys
- Mirzamys louiseae - Mirza's western moss rat
- Mirzamys norahae - Mirza's eastern moss rat
Genus Montemys
- Montemys delectorum - delectable soft-furred mouse
Genus Muriculus
- Muriculus imberbis - striped-back mouse
Genus Mus
- Mus baoulei - Baoule's mouse
- Mus booduga - Little Indian field mouse
- Mus bufo - Toad mouse
- Mus callewaerti - Callewaert's mouse
- Mus caroli - Ryukyu mouse
- Mus cervicolor - Fawn-coloured mouse
- Mus cookii - Cook's mouse
- Mus crociduroides - Sumatran shrewlike mouse
- Mus cypriacus - Cypriot mouse
- Mus famulus - Servant mouse
- Mus fernandoni - Ceylon spiny mouse
- Mus fragilicauda - Sheath-tailed mouse
- Mus goundae - Gounda mouse
- Mus haussa - Hausa mouse
- Mus indutus - desert pygmy mouse
- Mus lepidoides - Little Burmese field mouse
- Mus macedonicus - Macedonian mouse
- Mus mahomet - Mahomet mouse
- Mus mattheyi - Matthey's mouse
- Mus mayori - Mayor's mouse
- Mus minutoides - African pygmy mouse
- Mus musculoides - Temminck's mouse
- Mus musculus - House mouse
  - Mus musculus domesticus - Western European house mouse
  - Mus musculus molossinus - Japanese house mouse
- Mus neavei - Neave's mouse
- Mus nitidulus - Blyth's mouse
- Mus orangiae - Free State pygmy mouse/orange mouse
- Mus oubanguii - Oubangui mouse
- Mus pahari - Gairdner's shrewmouse
- Mus phillipsi - Phillips's mouse
- Mus platythrix - Flat-haired mouse
- Mus saxicola - Rock-loving mouse
- Mus setulosus - Peters's mouse
- Mus setzeri - Setzer's pygmy mouse
- Mus shortridgei - Shortridge's mouse
- Mus sorella - Thomas's pygmy mouse
- Mus spicilegus - Mound-building mouse/steppe mouse
- Mus spretus - Algerian mouse
- Mus tenellus - Delicate mouse
- Mus terricolor - Earth-coloured mouse
- Mus triton - Gray-bellied pygmy mouse
- Mus vulcani - Volcano mouse
Genus Musseromys
- Musseromys anacuao - Sierra Madre tree-mouse
- Musseromys beneficus - Mount Pulag tree-mouse
- Musseromys gulantang - Banahaw tree mouse
- Musseromys inopinatus - Amuyao tree-mouse
Genus Mylomys
- Mylomys dybowskii - African groove-toothed rat
- Mylomys rex - Ethiopian mylomys
Genus Myomyscus
- Myomyscus verreauxii - Verreaux's white-footed rat
Genus Nesokia
- Nesokia bunnii - Bunn's short-tailed bandicoot rat
- Nesokia indica - short-tailed bandicoot rat
Genus Nesoromys
- Nesoromys ceramicus - Seram Island mountain rat
Genus Nilopegamys
- Nilopegamys plumbeus - Ethiopian amphibious rat
Genus Niviventer
- Niviventer andersoni - Anderson's white-bellied rat
- Niviventer brahma - Brahma white-bellied rat
- Niviventer bukit - Bukit white-bellied rat
- Niviventer cameroni - Cameron highlands niviventer
- Niviventer confucianus - Chinese white-bellied rat
- Niviventer coninga - spiny Taiwan niviventer
- Niviventer cremoriventer - dark-tailed tree rat
- Niviventer culturatus - Oldfield white-bellied rat
- Niviventer eha - smoke-bellied rat
- Niviventer excelsior - large white-bellied rat
- Niviventer fengi - Tibetan white-bellied rat
- Niviventer fraternus - montane Sumatran niviventer
- Niviventer fulvescens - chestnut white-bellied rat
- Niviventer hinpoon - limestone rat
- Niviventer huang - South China white-bellied rat
- Niviventer langbianis - Lang Bian white-bellied rat
- Niviventer lepturus - narrow-tailed white-bellied rat
- Niviventer lotipes - Hainan white-bellied rat
- Niviventer mekongis - Mekong white-bellied rat
- Niviventer niviventer - white-bellied rat
- Niviventer rapit - long-tailed mountain rat
- Niviventer tenaster - Tenasserim white-bellied rat
Genus Notomys
- Notomys alexis - Spinifex hopping mouse
- Notomys amplus - Short-tailed hopping mouse (extinct)
- Notomys aquilo - Northern hopping mouse
- Notomys cervinus - Fawn hopping mouse
- Notomys fuscus - Dusky hopping mouse
- Notomys longicaudatus - Long-tailed hopping mouse (extinct)
- Notomys mitchellii - Mitchell's hopping mouse
- Notomys macrotis - Big-eared hopping mouse (extinct)
- Notomys mordax - Darling Downs hopping mouse (extinct)
- Notomys robustus - Great hopping mouse (extinct)
Genus Ochromyscus
- Ochromyscus brockmani - Brockman's rock mouse
- Ochromyscus yemeni - Yemeni mouse
Genus Oenomys
- Oenomys hypoxanthus - rufous-nosed rat
  - Oenomys hypoxanthus albiventris
- Oenomys ornatus - Ghana rufous-nosed rat
- Oenomys tiercelini
Genus Palawanomys
- Palawanomys furvus - Palawan soft-furred mountain rat
Genus Papagomys
- Papagomys armandvillei - Flores giant rat
- Papagomys theodorverhoeveni - Verhoeven's giant tree rat (extinct)
Genus Parahydromys
- Parahydromys asper - New Guinea waterside rat
Genus Paraleptomys
- Paraleptomys rufilatus - northern water rat
- Paraleptomys wilhelmina - short-haired water rat
Genus Paramelomys
- Paramelomys gressitti - Gressitt's paramelomys
- Paramelomys levipes - Papuan lowland paramelomys
- Paramelomys lorentzii - Lorentz's paramelomys
- Paramelomys mollis - montane soft-furred paramelomys
- Paramelomys moncktoni - Monckton's paramelomys
- Paramelomys naso - long-nosed paramelomys
- Paramelomys platyops - common lowland paramelomys
- Paramelomys rubex - mountain paramelomys
- Paramelomys steini - Stein's paramelomys
Genus Paruromys
- Paruromys dominator - Sulawesi bear rat
Genus Paulamys
- Paulamys naso - Flores long-nosed rat
Genus Pelomys
- Pelomys campanae - bell groove-toothed swamp rat
- Pelomys fallax - creek groove-toothed swamp rat
- Pelomys hopkinsi - Hopkins's groove-toothed swamp rat
- Pelomys isseli - Issel's groove-toothed swamp rat
- Pelomys minor - least groove-toothed swamp rat
Genus Phloeomys
- Phloeomys cumingi - southern Luzon giant cloud rat
- Phloeomys pallidus - northern Luzon giant cloud rat
Genus Pithecheir
- Pithecheir melanurus - red tree rat
- Pithecheir parvus - Malayan tree rat
Genus Pithecheirops
- Pithecheirops otion - Bornean pithecheirops
Genus Pogonomelomys
- Pogonomelomys brassi - Grey pogonomelomys
- Pogonomelomys bruijni - lowland brush mouse
- Pogonomelomys mayeri - Shaw Mayer's brush mouse
Genus Pogonomys
- Pogonomys championi - Champion's tree mouse
- Pogonomys fergussoniensis - D'Entrecasteaux Archipelago pogonomys
- Pogonomys loriae - large tree mouse
- Pogonomys macrourus - chestnut tree mouse
- Pogonomys mollipilosus - Prehensile-tailed rat
- Pogonomys sylvestris - gray-bellied tree mouse
Genus Praomys
- Praomys coetzeei - Coetzee's soft-furred mouse
- Praomys daltoni - Dalton's praomys
- Praomys degraaffi - De Graaff's praomys
- Praomys derooi - Deroo's praomys
- Praomys hartwigi - Hartweg's soft-furred mouse
- Praomys jacksoni - Jackson's soft-furred mouse
- Praomys minor - least soft-furred mouse
- Praomys misonnei - Misonne's soft-furred mouse
- Praomys morio - Cameroon soft-furred mouse
- Praomys mutoni - Muton's soft-furred mouse
- Praomys obscurus - Gotel Mountain praomys
- Praomys petteri - Petter's praomys
- Praomys rostratus - forest soft-furred mouse
- Praomys tullbergi - Tullberg's soft-furred mouse
Genus Protochromys
- Protochromys fellowsi - Papuan protochromys
Genus Pseudohydromys
- Pseudohydromys berniceae - Bishop's moss mouse
- Pseudohydromys carlae - Huon small-toothed moss mouse
- Pseudohydromys eleanorae - Laurie's moss mouse
- Pseudohydromys ellermani - Shaw Mayer's shrew mouse
- Pseudohydromys fuscus - mottled-tailed shrew mouse
- Pseudohydromys germani - German's one-toothed moss mouse
- Pseudohydromys murinus - eastern shrew mouse
- Pseudohydromys musseri - Musser's shrew mouse
- Pseudohydromys occidentalis - western shrew mouse
- Pseudohydromys patriciae - Woolley's moss mouse
- Pseudohydromys pumehanae - Southern small-toothed moss mouse
- Pseudohydromys sandrae - White-bellied moss mouse
Genus Pseudomys
- Pseudomys albocinereus - Ash-grey mouse
- Pseudomys apodemoides - Silky mouse
- Pseudomys australis - Plains rat
- Pseudomys bolami - Bolam's mouse
- Pseudomys calabyi - Kakadu pebble-mound mouse
- Pseudomys chapmani - Western pebble-mound mouse
- Pseudomys delicatulus - Little native mouse
- Pseudomys desertor - Desert mouse
- Pseudomys fieldi?
- Pseudomys fumeus - Smoky mouse
- Pseudomys glaucus - Blue-gray mouse (possibly extinct)
- Pseudomys gouldii - Gould's mouse
- Pseudomys gracilicaudatus - Eastern chestnut mouse
- Pseudomys hermannsburgensis - Sandy inland mouse
- Pseudomys higginsi - Long-tailed mouse
- Pseudomys johnsoni - Central pebble-mound mouse
- Pseudomys laborifex?
- Pseudomys nanus - Western chestnut mouse
- Pseudomys novaehollandiae - New Holland mouse
- Pseudomys occidentalis - Western mouse
- Pseudomys oralis - Hastings River mouse
- Pseudomys patrius - Country mouse
- Pseudomys pilligaensis - Pilliga mouse
- Pseudomys praeconis?
- Pseudomys shortridgei - Heath mouse
- Pseudomys vandycki (extinct)
Genus Rattus
- Rattus adustus - Sunburned rat
- Rattus andamanensis - Sikkim rat
- Rattus arfakiensis - Vogelkop mountain rat
- Rattus argentiventer - Ricefield rat
- Rattus arrogans - Western New Guinea mountain rat
- Rattus baluensis - Summit rat
- Rattus blangorum - Aceh rat
- Rattus bontanus - Bonthain rat
- Rattus burrus - Nonsense rat
- Rattus colletti - Dusky rat
- Rattus detentus - Manus Island spiny rat
- Rattus elaphinus - Sula rat
- Rattus enganus - Enggano rat
- Rattus everetti - Philippine forest rat
- Rattus exulans - Polynesian rat
- Rattus facetus - Lore Lindu xanthurus rat
- Rattus feliceus - Spiny Ceram rat
- Rattus foramineus?
- Rattus fuscipes - bush rat
- Rattus giluwensis - Giluwe rat
- Rattus hainaldi - Hainald's rat
- Rattus hoffmanni - Hoffmann's rat
- Rattus hoogerwerfi - Hoogerwerf's rat
- Rattus jobiensis - Japen rat
- Rattus koopmani - Koopman's rat
- Rattus korinchi - Korinch's rat
- Rattus leucopus - Cape York rat
- Rattus losea - Lesser ricefield rat
- Rattus lugens - Mentawai rat
- Rattus lutreolus - Australian swamp rat
- Rattus macleari - Maclear's rat
- Rattus marmosurus - Opossum rat
- Rattus mindorensis - Mindoro black rat
- Rattus mollicomulus - Little soft-furred rat
- Rattus montanus - Nillu rat
- Rattus mordax - Eastern rat
- Rattus morotaiensis - Molaccan prehensile-tailed rat
- Rattus nativitatis - bulldog rat, extinct (1903)
- Rattus nikenii - Gag Island rat
- Rattus niobe - Moss-forest rat
- Rattus nitidus - Himalayan field rat
- Rattus norvegicus - Brown rat
- Rattus novaeguineae - New Guinean rat
- Rattus omichlodes - Arianus's rat
- Rattus osgoodi - Osgood's rat
- Rattus palmarum - Palm rat
- Rattus pelurus - Peleng rat
- Rattus pococki - Pocock's highland rat
- Rattus praetor - Large New Guinea spiny rat
- Rattus pyctoris - Turkestan rat
- Rattus ranjiniae - Kerala rat
- Rattus rattus - Black rat
- Rattus richardsoni - Glacier rat
- Rattus sakeratensis - little Indochinese field rat
- Rattus salocco - Southeastern xanthurus rat
- Rattus sanila - New Ireland forest rat
- Rattus satarae - Sahyadris forest rat
- Rattus sikkimensis?
- Rattus simalurensis - Simalur rat
- Rattus sordidus - Dusky field rat
- Rattus steini - Stein's rat
- Rattus stoicus - Andaman rat
- Rattus tanezumi - Tanezumi rat
- Rattus tawitawiensis - Tawitawi forest rat
- Rattus timorensis - Timor rat
- Rattus tiomanicus - Malayan field rat
- Rattus tunneyi - Pale field rat
- Rattus turkestanicus?
- Rattus vandeuseni - Van Deusen's rat
- Rattus verecundus - Slender rat
- Rattus villosissimus - Long-haired rat
- Rattus xanthurus - Yellow-tailed rat
Genus Serengetimys
- Serengetimys pernanus - dwarf multimammate mouse
Genus Rhabdomys
- Rhabdomys dilectus - mesic four-striped grass rat
- Rhabdomys pumilio - Four-striped grass mouse
Genus Rhynchomys
- Rhynchomys banahao - Banahao shrew-rat
- Rhynchomys isarogensis - Isarog shrew-rat
- Rhynchomys labo - Labo shrew rat
- Rhynchomys mingan - Mingan shrew-rat
- Rhynchomys soricoides - Mt. Data shrew-rat
- Rhynchomys tapulao - Tapulao shrew-rat
Genus Saxatilomys
- Saxatilomys paulinae - Paulina's limestone rat
Genus Solomys
- Solomys ponceleti - Poncelet's naked-tailed rat
- Solomys salamonis - Florida naked-tailed rat
- Solomys salebrosus - Bougainville naked-tailed rat
- Solomys sapientis - Isabel naked-tailed rat
- Solomys spriggsarum - Buka naked-tailed rat (extinct)
Genus Soricomys
- Soricomys kalinga - Kalinga shrew mouse
- Soricomys leonardocoi - Leonardo shrew mouse
- Soricomys montanus - Southern Cordillera shrew-mouse
- Soricomys musseri - Sierra Madre shrew-mouse
Genus Sommeromys
- Sommeromys macrorhinos - Sommer's Sulawesi rat
Genus Spelaeomys
- Spelaeomys florensis - Flores cave rat
Genus Srilankamys
- Srilankamys ohiensis - Ohiya rat
Genus Stenocephalemys
- Stenocephalemys albipes - white-footed stenocephalemys
- Stenocephalemys albocaudata - Ethiopian narrow-headed rat
- Stenocephalemys griseicauda - gray-tailed narrow-headed rat
- Stenocephalemys ruppi - Rupp's stenocephalemys
- Stenocephalemys sokolovi - Sokolov's Ethiopian rat
- Stenocephalemys zimai - Zima's Ethiopian rat
Genus Stochomys
- Stochomys longicaudatus - target rat
Genus Sundamys
- Sundamys annandalei - Annandale's rat
- Sundamys infraluteus - mountain giant rat
- Sundamys maxi - Bartels's rat
- Sundamys muelleri - Mueller's giant Sunda rat
Genus Taeromys
- Taeromys arcuatus - Salokko rat
- Taeromys callitrichus - lovely-haired rat
- Taeromys celebensis - Celebes rat
- Taeromys hamatus - Sulawesi montane rat
- Taeromys microbullatus - small-eared taeromys
- Taeromys punicans - Sulawesi forest rat
- Taeromys taerae - Tondano rat
Genus Tarsomys
- Tarsomys apoensis - long-footed rat
- Tarsomys echinatus - spiny long-footed rat
Genus Tateomys
- Tateomys macrocercus - Long-tailed shrew rat
- Tateomys rhinogradoides - Tate's shrew rat
Genus Thallomys
- Thallomys loringi - Loring's rat
- Thallomys nigricauda - Black-tailed tree rat
- Thallomys paedulcus - Acacia rat
- Thallomys shortridgei - Shortridge's rat
Genus Thamnomys
- Thamnomys kempi - Kemp's thicket rat
- Thamnomys major - Hatt's thicket rat
- Thamnomys rutilans?
- Thamnomys venustus - Charming thicket rat
Genus Tokudaia
- Tokudaia muenninki - Muennink's spiny rat
- Tokudaia osimensis - Ryukyu spiny rat
- Tokudaia tokunoshimensis - Tokunoshima spiny rat
Genus Tonkinomys
- Tonkinomys daovantieni - Daovantien's limestone rat
Genus Tryphomys
- Tryphomys adustus - Luzon short-nosed rat
Genus Uromys
- Uromys anak - Giant naked-tailed rat
- Uromys boeadii - Biak giant rat
- Uromys caudimaculatus - giant white-tailed rat
- Uromys emmae - Emma's giant rat
- Uromys hadrourus - Masked white-tailed rat
- Uromys imperator - Emperor rat
- Uromys neobritanicus - Bismarck giant rat
- Uromys porculus - Guadalcanal rat
- Uromys rex - King rat
- Uromys siebersi - Great Key Island giant rat
- Uromys vika - Vangunu giant rat
Genus Vandeleuria
- Vandeleuria nilagirica - Nilgiri long-tailed tree mouse
- Vandeleuria nolthenii - Nolthenius's long-tailed climbing mouse
- Vandeleuria oleracea - Asiatic long-tailed climbing mouse
Genus Vernaya
- Vernaya foramena
- Vernaya fulva - red climbing mouse
- Vernaya meiguites
- Vernaya nushanensis
- Vernaya prefulva (extinct)
- Vernaya pristina (extinct)
- Vernaya giganta (extinct)
- Vernaya wushanica (extinct)
Genus Xenuromys
- Xenuromys barbatus - Mimic tree rat
Genus Xeromys
- Xeromys myoides - false water rat
Genus Zelotomys
- Zelotomys hildegardeae - Hildegarde's broad-headed mouse
- Zelotomys woosnami - Woosnam's broad-headed mouse
Genus Zyzomys
- Zyzomys argurus - common rock rat
- Zyzomys maini - Arnhem Land rock rat
- Zyzomys palatilis - Carpentarian rock rat
- Zyzomys pedunculatus - central rock rat
- Zyzomys woodwardi - Kimberley rock rat

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Suborder Hystricomorpha

Family Ctenodactylidae

Family Diatomyidae

Family Bathyergidae

Family Heterocephalidae

Family Hystricidae

Family Petromuridae

Family Thryonomyidae

Family Erethizontidae

Subfamily Chaetomyinae

Subfamily Erethizontinae

Family Chinchillidae

Family Dinomyidae

Family Caviidae

Subfamily Caviinae

Subfamily Dolichotinae

Subfamily Hydrochoerinae

Family Dasyproctidae

Family Cuniculidae

Family Ctenomyidae

Family Octodontidae

Family Abrocomidae

Family Echimyidae

Subfamily Dactylomyinae

Subfamily Echimyinae

Subfamily Eumysopinae

Subfamily Heteropsomyinae

Subfamily Capromyinae (hutias)

Tribe Capromyini

Tribe Plagiodontini

Tribe Isolobodontini

Tribe Hexolobodontini

Family Heptaxodontidae

Subfamily Clidomyinae

Subfamily Heptaxodontinae

Family Myocastoridae

Suborder Anomaluromorpha

Family Anomaluridae

Subfamily Anomalurinae

Subfamily Zenkerellinae

Family Pedetidae

Suborder Sciuromorpha

Family Aplodontidae

Family Sciuridae

Subfamily Ratufinae

Subfamily Sciurillinae

Subfamily Sciurinae

Tribe Sciurini

Tribe Pteromyini

Subfamily Callosciurinae

Subfamily Xerinae

Tribe Xerini

Tribe Protoxerini

Tribe Marmotini

Family Gliridae

Subfamily Graphiurinae

Subfamily Leithiinae

Subfamily Glirinae

Suborder Castorimorpha

Family Castoridae

Family Geomyidae

Family Heteromyidae

Subfamily Dipodomyinae

Subfamily Heteromyinae

Subfamily Perognathinae

Suborder Myomorpha

Family Dipodidae

Subfamily Allactaginae

Subfamily Cardiocraniinae

Subfamily Dipodinae

Subfamily Euchoreutinae

Subfamily Sicistinae

Subfamily Zapodinae

Family Platacanthomyidae

Family Spalacidae

Subfamily Myospalacinae

Subfamily Rhizomyinae

Subfamily Tachyoryctinae

Subfamily Spalacinae

Family Calomyscidae